Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   I6J14_RS05340 Genome accession   NZ_CP068057
Coordinates   1092730..1092912 (-) Length   60 a.a.
NCBI ID   WP_115252461.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1157     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1087730..1097912
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J14_RS05320 (I6J14_05320) rplA 1088350..1089039 (-) 690 WP_003049876.1 50S ribosomal protein L1 -
  I6J14_RS05325 (I6J14_05325) rplK 1089145..1089570 (-) 426 WP_003049875.1 50S ribosomal protein L11 -
  I6J14_RS05330 (I6J14_05330) - 1089813..1090166 (+) 354 WP_037584912.1 DUF3397 family protein -
  I6J14_RS05335 (I6J14_05335) - 1090235..1092643 (-) 2409 WP_115252693.1 DNA translocase FtsK -
  I6J14_RS05340 (I6J14_05340) prx 1092730..1092912 (-) 183 WP_115252461.1 Paratox Regulator
  I6J14_RS05345 (I6J14_05345) spel 1093029..1093778 (-) 750 WP_115276481.1 streptococcal pyrogenic exotoxin SpeL -
  I6J14_RS05350 (I6J14_05350) spem 1094096..1094812 (-) 717 WP_115252463.1 streptococcal pyrogenic exotoxin SpeM -
  I6J14_RS05355 (I6J14_05355) - 1094947..1095873 (-) 927 WP_115252464.1 hypothetical protein -
  I6J14_RS05360 (I6J14_05360) - 1095878..1096054 (-) 177 WP_160147946.1 hypothetical protein -
  I6J14_RS05365 (I6J14_05365) - 1096064..1096837 (-) 774 WP_115252465.1 hypothetical protein -
  I6J14_RS05370 (I6J14_05370) - 1096848..1097450 (-) 603 WP_115252473.1 hypothetical protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 7157.11 Da        Isoelectric Point: 4.0474

>NTDB_id=458677 I6J14_RS05340 WP_115252461.1 1092730..1092912(-) (prx) [Streptococcus dysgalactiae strain FDAARGOS_1157]
MLTYDEFKQAIDDGYITGGTVMIVRKNGQIFDYVLPNEEIRDWEVVTEERVKEVMWELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=458677 I6J14_RS05340 WP_115252461.1 1092730..1092912(-) (prx) [Streptococcus dysgalactiae strain FDAARGOS_1157]
ATGCTAACATACGATGAATTTAAGCAGGCAATTGATGACGGATATATCACAGGAGGCACAGTTATGATCGTGCGCAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGAATGAGGAGATAAGAGATTGGGAGGTTGTGACAGAGGAGAGGGTGAAAGAGG
TGATGTGGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS315

76.667

100

0.767
  prx Streptococcus pyogenes MGAS315

76.667

100

0.767
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS8232

70

100

0.7
  prx Streptococcus pyogenes MGAS315

88.095

70

0.617
  prx Streptococcus pyogenes MGAS315

73.81

70

0.517