Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   I6J14_RS04175 Genome accession   NZ_CP068057
Coordinates   871171..871350 (-) Length   59 a.a.
NCBI ID   WP_115276380.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1157     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 866171..876350
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J14_RS04155 (I6J14_04155) gyrB 866781..868733 (-) 1953 WP_003050110.1 DNA topoisomerase (ATP-hydrolyzing) subunit B -
  I6J14_RS04160 (I6J14_04160) - 868734..869294 (-) 561 WP_115253253.1 HAD-IA family hydrolase -
  I6J14_RS04165 (I6J14_04165) - 869396..870607 (-) 1212 WP_115252762.1 FtsW/RodA/SpoVE family cell cycle protein -
  I6J14_RS04175 (I6J14_04175) prx 871171..871350 (-) 180 WP_115276380.1 Paratox Regulator
  I6J14_RS04180 (I6J14_04180) - 871584..872576 (+) 993 WP_115276379.1 DNA/RNA non-specific endonuclease -
  I6J14_RS04185 (I6J14_04185) - 872719..873279 (-) 561 WP_011018106.1 GNAT family N-acetyltransferase -
  I6J14_RS04190 (I6J14_04190) - 873312..873476 (-) 165 WP_003051631.1 hypothetical protein -
  I6J14_RS04195 (I6J14_04195) - 873624..874826 (-) 1203 WP_115276378.1 glucosaminidase domain-containing protein -
  I6J14_RS04200 (I6J14_04200) - 874938..875123 (-) 186 WP_003051640.1 holin -
  I6J14_RS04205 (I6J14_04205) - 875120..875419 (-) 300 WP_003051643.1 hypothetical protein -
  I6J14_RS04210 (I6J14_04210) - 875430..876044 (-) 615 WP_115276377.1 DUF1366 domain-containing protein -
  I6J14_RS04215 (I6J14_04215) - 876047..876208 (-) 162 WP_003052363.1 hypothetical protein -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 7042.96 Da        Isoelectric Point: 3.9421

>NTDB_id=458669 I6J14_RS04175 WP_115276380.1 871171..871350(-) (prx) [Streptococcus dysgalactiae strain FDAARGOS_1157]
MLTYDEFKQAIDDGYITGGTVKIVRKNGQIFDYVLPNEEIRDWEVVTEERVEEVMMELW

Nucleotide


Download         Length: 180 bp        

>NTDB_id=458669 I6J14_RS04175 WP_115276380.1 871171..871350(-) (prx) [Streptococcus dysgalactiae strain FDAARGOS_1157]
ATGCTAACATACGACGAATTTAAACAGGCAATTGATGACGGATATATCACAGGAGGCACAGTCAAGATCGTGCGCAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGAATGAGGAGATAAGAGATTGGGAGGTTGTGACAGAGGAGAGGGTGGAAGAGG
TGATGATGGAATTGTGGTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

82.759

98.305

0.814
  prx Streptococcus pyogenes MGAS315

77.586

98.305

0.763
  prx Streptococcus pyogenes MGAS315

75.862

98.305

0.746
  prx Streptococcus pyogenes MGAS8232

74.138

98.305

0.729
  prx Streptococcus pyogenes MGAS315

85.714

71.186

0.61
  prx Streptococcus pyogenes MGAS315

82.927

69.492

0.576
  prx Streptococcus pyogenes MGAS315

73.81

71.186

0.525