Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   C9Q_RS01395 Genome accession   NZ_CP067090
Coordinates   261526..262077 (+) Length   183 a.a.
NCBI ID   WP_011106595.1    Uniprot ID   -
Organism   Streptococcus pyogenes MGAS10870     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 256526..267077
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9Q_RS01395 (C9Q_01410) comX/sigX/comX2/sigX2 261526..262077 (+) 552 WP_011106595.1 sigma-70 family RNA polymerase sigma factor Regulator
  C9Q_RS01400 (C9Q_01415) - 262688..263821 (+) 1134 WP_032461370.1 ISAs1 family transposase -
  C9Q_RS01410 (C9Q_01420) - 263984..264511 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  C9Q_RS01415 (C9Q_01425) yqeH 264511..265629 (+) 1119 WP_002991828.1 ribosome biogenesis GTPase YqeH -
  C9Q_RS01420 (C9Q_01430) yhbY 265654..265962 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  C9Q_RS01425 (C9Q_01435) - 266031..266663 (+) 633 WP_002991091.1 nicotinate-nucleotide adenylyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22309.13 Da        Isoelectric Point: 10.0375

>NTDB_id=457047 C9Q_RS01395 WP_011106595.1 261526..262077(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes MGAS10870]
MSCCFFVVLFILGIVKKKRRLKMSIETRAVFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=457047 C9Q_RS01395 WP_011106595.1 261526..262077(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes MGAS10870]
ATGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGTGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATTTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.