Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   JHX98_RS05845 Genome accession   NZ_CP067010
Coordinates   1146438..1146620 (-) Length   60 a.a.
NCBI ID   WP_011888783.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain iGAS376     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1141438..1151620
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JHX98_RS05825 (JHX98_05825) - 1141875..1142570 (-) 696 WP_002983928.1 phosphoglycerate mutase -
  JHX98_RS05830 (JHX98_05830) - 1142809..1143744 (+) 936 WP_200221175.1 dihydroorotate oxidase -
  JHX98_RS05835 (JHX98_05835) - 1143799..1143972 (-) 174 WP_011017962.1 hypothetical protein -
  JHX98_RS05840 (JHX98_05840) - 1144044..1145906 (-) 1863 WP_011888784.1 heavy metal translocating P-type ATPase -
  JHX98_RS05845 (JHX98_05845) prx 1146438..1146620 (-) 183 WP_011888783.1 hypothetical protein Regulator
  JHX98_RS05850 (JHX98_05850) - 1146686..1147480 (-) 795 WP_011888782.1 DNA/RNA non-specific endonuclease -
  JHX98_RS05855 (JHX98_05855) - 1147702..1147902 (-) 201 WP_011888781.1 CsbD family protein -
  JHX98_RS05860 (JHX98_05860) - 1148086..1149057 (-) 972 WP_011888780.1 Abi family protein -
  JHX98_RS05865 (JHX98_05865) - 1149351..1150568 (-) 1218 WP_023077240.1 peptidoglycan amidohydrolase family protein -
  JHX98_RS05870 (JHX98_05870) - 1150682..1150867 (-) 186 WP_011888776.1 holin -
  JHX98_RS05875 (JHX98_05875) - 1150864..1151163 (-) 300 WP_002988799.1 hypothetical protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6917.86 Da        Isoelectric Point: 4.3455

>NTDB_id=456984 JHX98_RS05845 WP_011888783.1 1146438..1146620(-) (prx) [Streptococcus pyogenes strain iGAS376]
MLTYDEFKQAIDNGYITGDTVMIVRKNGQIFDYVLPHEKVKNGEVVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=456984 JHX98_RS05845 WP_011888783.1 1146438..1146620(-) (prx) [Streptococcus pyogenes strain iGAS376]
ATGTTAACATACGATGAATTTAAGCAAGCGATTGACAATGGATATATCACAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTTTTGCCACATGAGAAAGTAAAGAATGGAGAAGTTGTGACAGACGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

93.333

100

0.933
  prx Streptococcus pyogenes MGAS315

91.667

100

0.917
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS315

88.372

71.667

0.633
  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55