Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | HUI95_RS03955 | Genome accession | NZ_CP054854 |
| Coordinates | 836574..836894 (-) | Length | 106 a.a. |
| NCBI ID | WP_017780975.1 | Uniprot ID | - |
| Organism | Aeromonas dhakensis strain 1706-28330 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 831574..841894
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUI95_RS03935 (HUI95_03930) | - | 831880..832557 (-) | 678 | WP_206866467.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| HUI95_RS03940 (HUI95_03935) | - | 832913..833884 (+) | 972 | WP_005309570.1 | response regulator | - |
| HUI95_RS03945 (HUI95_03940) | - | 833957..835354 (-) | 1398 | WP_017783362.1 | peptide MFS transporter | - |
| HUI95_RS03950 (HUI95_03945) | galU | 835568..836479 (-) | 912 | WP_005309577.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| HUI95_RS03955 (HUI95_03950) | comEA | 836574..836894 (-) | 321 | WP_017780975.1 | ComEA family DNA-binding protein | Machinery gene |
| HUI95_RS03960 (HUI95_03955) | cysQ | 837061..837831 (+) | 771 | WP_201970745.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| HUI95_RS03965 (HUI95_03960) | - | 837910..838206 (-) | 297 | WP_005309589.1 | YciI family protein | - |
| HUI95_RS03970 (HUI95_03965) | - | 838232..838783 (-) | 552 | WP_206866468.1 | septation protein A | - |
| HUI95_RS03975 (HUI95_03970) | - | 838888..840393 (-) | 1506 | WP_017783365.1 | pyridoxal-dependent decarboxylase | - |
| HUI95_RS03980 (HUI95_03975) | - | 840611..841246 (+) | 636 | WP_010636289.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11155.96 Da Isoelectric Point: 8.9714
>NTDB_id=454953 HUI95_RS03955 WP_017780975.1 836574..836894(-) (comEA) [Aeromonas dhakensis strain 1706-28330]
MNYKTLTATLLLSCLPLLSQPLLAADKPAATPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAATPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=454953 HUI95_RS03955 WP_017780975.1 836574..836894(-) (comEA) [Aeromonas dhakensis strain 1706-28330]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCACACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACCGCGCTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGGCCGGCCACGCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCACACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACCGCGCTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGGCCGGCCACGCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comEA | Legionella pneumophila strain ERS1305867 |
42.857 |
92.453 |
0.396 |
| comEA | Legionella pneumophila str. Paris |
42.857 |
92.453 |
0.396 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
52.632 |
71.698 |
0.377 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |