Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   I6I02_RS07360 Genome accession   NZ_CP066093
Coordinates   1620978..1621163 (+) Length   61 a.a.
NCBI ID   WP_070839405.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_1045     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1615978..1626163
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I02_RS07325 (I6I02_07325) - 1616603..1617346 (+) 744 WP_003095064.1 ABC transporter permease -
  I6I02_RS07330 (I6I02_07330) - 1617348..1618082 (+) 735 WP_070839422.1 ABC transporter permease -
  I6I02_RS11010 - 1618341..1618481 (+) 141 Protein_1455 transposase -
  I6I02_RS11015 - 1618533..1618643 (+) 111 Protein_1456 oxidoreductase -
  I6I02_RS07340 (I6I02_07340) - 1618713..1618988 (-) 276 WP_070839416.1 helix-turn-helix domain-containing protein -
  I6I02_RS07345 (I6I02_07345) - 1618975..1619340 (-) 366 WP_061597416.1 type II toxin-antitoxin system RelE/ParE family toxin -
  I6I02_RS07350 (I6I02_07350) - 1620005..1620445 (+) 441 WP_070839414.1 ASCH domain-containing protein -
  I6I02_RS07355 (I6I02_07355) - 1620649..1620858 (+) 210 WP_198463364.1 hypothetical protein -
  I6I02_RS07360 (I6I02_07360) prx 1620978..1621163 (+) 186 WP_070839405.1 Paratox Regulator
  I6I02_RS11165 - 1621211..1621354 (-) 144 Protein_1462 IS5/IS1182 family transposase -
  I6I02_RS07365 (I6I02_07365) - 1621485..1622084 (+) 600 WP_198463365.1 helix-turn-helix domain-containing protein -
  I6I02_RS07370 (I6I02_07370) - 1622457..1622612 (+) 156 WP_198463366.1 hypothetical protein -
  I6I02_RS07375 (I6I02_07375) - 1622728..1623810 (+) 1083 WP_232621256.1 hypothetical protein -
  I6I02_RS07380 (I6I02_07380) - 1623846..1624244 (+) 399 WP_080610235.1 hypothetical protein -
  I6I02_RS07385 (I6I02_07385) - 1624255..1624656 (+) 402 WP_045772505.1 hypothetical protein -

Sequence


Protein


Download         Length: 61 a.a.        Molecular weight: 7096.11 Da        Isoelectric Point: 4.1169

>NTDB_id=453792 I6I02_RS07360 WP_070839405.1 1620978..1621163(+) (prx) [Streptococcus salivarius strain FDAARGOS_1045]
MMTYDEVMEAIERGFIKGDKISIIRRNGKIHDYVLPGEKVEPGEIVEEEDLDVVLEELKEF

Nucleotide


Download         Length: 186 bp        

>NTDB_id=453792 I6I02_RS07360 WP_070839405.1 1620978..1621163(+) (prx) [Streptococcus salivarius strain FDAARGOS_1045]
ATGATGACTTATGATGAAGTAATGGAAGCGATAGAAAGAGGGTTTATCAAGGGAGATAAAATCAGTATTATTCGACGAAA
TGGCAAGATCCATGATTATGTTTTACCAGGAGAGAAAGTAGAACCTGGAGAAATAGTGGAAGAAGAGGACTTAGATGTTG
TCCTTGAAGAGTTGAAGGAGTTCTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

54.237

96.721

0.525

  prx Streptococcus pyogenes MGAS8232

53.448

95.082

0.508

  prx Streptococcus pyogenes MGAS315

51.724

95.082

0.492

  prx Streptococcus pyogenes MGAS315

51.724

95.082

0.492

  prx Streptococcus pyogenes MGAS315

61.905

68.852

0.426

  prx Streptococcus pyogenes MGAS315

60

65.574

0.393

  prx Streptococcus pyogenes MGAS315

53.488

70.492

0.377