Detailed information NTG0453741

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: HT135_RS18310
• Genome accession: NZ_CP054584
• Coordinates: 3560041..3560637 (+)
• Length: 198 a.a.
• NCBI ID: WP_003219849.1
• Uniprot ID: A0A9W5LL57
• Organism: Bacillus halotolerans strain KKD1
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3555041..3565637

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HT135_RS18280 (HT135_18275)	-	3555321..3555635 (+)	315	WP_024122952.1	DMT family transporter	-
HT135_RS18285 (HT135_18280)	-	3555680..3556195 (-)	516	WP_024122953.1	DUF3231 family protein	-
HT135_RS18290 (HT135_18285)	-	3556258..3556407 (+)	150	WP_174754435.1	hypothetical protein	-
HT135_RS18295 (HT135_18290)	-	3556485..3557828 (-)	1344	WP_106019607.1	FAD-binding oxidoreductase	-
HT135_RS18300 (HT135_18295)	cotR	3558299..3559261 (+)	963	WP_106019608.1	sporulation hydrolase CotR	-
HT135_RS18310 (HT135_18305)	clpP	3560041..3560637 (+)	597	WP_003219849.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
HT135_RS18315 (HT135_18310)	-	3560672..3561247 (-)	576	WP_106019609.1	TIGR00730 family Rossman fold protein	-
HT135_RS18320 (HT135_18315)	-	3561364..3561684 (+)	321	WP_106019610.1	MazG nucleotide pyrophosphohydrolase domain-containing protein	-
HT135_RS18325 (HT135_18320)	-	3561714..3563324 (-)	1611	WP_106019611.1	SulP family inorganic anion transporter	-
HT135_RS18330 (HT135_18325)	-	3563343..3563927 (-)	585	WP_095712951.1	beta-class carbonic anhydrase	-
HT135_RS18335 (HT135_18330)	-	3564331..3565308 (+)	978	WP_095712950.1	2-hydroxyacid dehydrogenase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21873.14 Da
• Isoelectric Point: 4.7114

>NTDB_id=453741 HT135_RS18310 WP_003219849.1 3560041..3560637(+) (clpP) [Bacillus halotolerans strain KKD1]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTRNTEEQK

Nucleotide

• Length: 597 bp

>NTDB_id=453741 HT135_RS18310 WP_003219849.1 3560041..3560637(+) (clpP) [Bacillus halotolerans strain KKD1]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGAAGCGG
AAGACCCTGAAAAAGATATTTCCATTTACATCAACAGCCCGGGCGGCTCTATCACGGCTGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCTTGCTTGCTGCCGG
AGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTTATGATTCACCAACCTCTTGGCGGTGCGCAAGGTCAGGCAA
CGGAAATTGAAATTGCCGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGCGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTCTGACTCGCAACACAGAAGAGCAAAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	96.465	100	0.965
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.063	96.465	0.657
clpP	Streptococcus thermophilus LMG 18311	59.067	97.475	0.576
clpP	Streptococcus thermophilus LMD-9	59.067	97.475	0.576
clpP	Streptococcus pneumoniae Rx1	57.732	97.98	0.566
clpP	Streptococcus pneumoniae D39	57.732	97.98	0.566
clpP	Streptococcus pneumoniae R6	57.732	97.98	0.566
clpP	Streptococcus pneumoniae TIGR4	57.732	97.98	0.566
clpP	Lactococcus lactis subsp. cremoris KW2	57.216	97.98	0.561
clpP	Streptococcus pyogenes JRS4	56.477	97.475	0.551
clpP	Streptococcus pyogenes MGAS315	56.477	97.475	0.551
clpP	Streptococcus mutans UA159	55.155	97.98	0.54
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.155	97.98	0.54