Detailed information    

insolico Bioinformatically predicted

Overview

Name   comFC/cflB   Type   Machinery gene
Locus tag   I6H72_RS04090 Genome accession   NZ_CP066055
Coordinates   829735..830400 (-) Length   221 a.a.
NCBI ID   WP_006267632.1    Uniprot ID   F9P4K7
Organism   Streptococcus constellatus strain FDAARGOS_1015     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 824735..835400
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H72_RS04060 (I6H72_04060) rlmN 824895..825977 (-) 1083 WP_049476508.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  I6H72_RS04065 (I6H72_04065) - 826011..826568 (-) 558 WP_003070172.1 YutD family protein -
  I6H72_RS04070 (I6H72_04070) sepM 826855..827910 (-) 1056 WP_070669255.1 SepM family pheromone-processing serine protease Regulator
  I6H72_RS04075 (I6H72_04075) coaD 827891..828388 (-) 498 WP_006267255.1 pantetheine-phosphate adenylyltransferase -
  I6H72_RS04080 (I6H72_04080) rsmD 828378..828917 (-) 540 WP_020997641.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  I6H72_RS04085 (I6H72_04085) hpf 829114..829656 (-) 543 WP_003032381.1 ribosome hibernation-promoting factor, HPF/YfiA family -
  I6H72_RS04090 (I6H72_04090) comFC/cflB 829735..830400 (-) 666 WP_006267632.1 ComF family protein Machinery gene
  I6H72_RS04095 (I6H72_04095) comFA/cflA 830397..831698 (-) 1302 WP_198458343.1 DEAD/DEAH box helicase Machinery gene
  I6H72_RS04100 (I6H72_04100) - 831755..832390 (+) 636 WP_003035211.1 YigZ family protein -
  I6H72_RS04105 (I6H72_04105) cysK 832489..833418 (+) 930 WP_198458344.1 cysteine synthase A -
  I6H72_RS04110 (I6H72_04110) - 833483..834096 (+) 614 Protein_821 transposase -
  I6H72_RS04115 (I6H72_04115) - 834201..834470 (+) 270 Protein_822 IS30 family transposase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25426.51 Da        Isoelectric Point: 7.3982

>NTDB_id=453316 I6H72_RS04090 WP_006267632.1 829735..830400(-) (comFC/cflB) [Streptococcus constellatus strain FDAARGOS_1015]
MNNCLLCESLLDEKLTFCDLLTLKKPKAKACDACFEKFQRISAQHCPKCYRDGIDEICIDCDVWTKKGKEVCHKSCFVYN
EAMKNFFSQYKFQGDYALSSVFTEVLHQELKNYNDYTLVPIPVSVEKYQARGFNQVTAFLEGTKLQFKEILEKYDTIAQS
SKMREERLQSQQCFKVKDKVTLPAKILLIDDIYTTGATLQLAKDILVEAGVKEILTFSLAR

Nucleotide


Download         Length: 666 bp        

>NTDB_id=453316 I6H72_RS04090 WP_006267632.1 829735..830400(-) (comFC/cflB) [Streptococcus constellatus strain FDAARGOS_1015]
ATGAATAACTGTCTGTTATGTGAAAGTCTACTTGATGAAAAGCTAACATTTTGTGATTTGCTGACTTTGAAGAAGCCCAA
AGCAAAAGCTTGTGATGCCTGTTTTGAAAAATTCCAGCGTATTTCAGCGCAACATTGCCCTAAGTGCTATCGTGACGGAA
TAGATGAAATCTGCATAGACTGTGATGTGTGGACAAAGAAAGGAAAAGAAGTTTGCCATAAGAGTTGTTTTGTCTATAAT
GAAGCTATGAAAAACTTCTTTAGTCAATATAAATTTCAAGGAGATTATGCTCTTTCTTCTGTATTTACTGAAGTTTTGCA
TCAAGAATTAAAAAATTATAACGATTATACACTCGTGCCAATTCCTGTGAGTGTAGAAAAGTATCAAGCAAGAGGGTTTA
ATCAAGTAACAGCTTTTCTTGAGGGTACAAAGTTGCAATTTAAGGAAATTTTAGAAAAATATGATACAATTGCTCAATCA
AGCAAGATGAGAGAGGAGCGATTGCAGAGCCAGCAGTGCTTTAAAGTAAAAGACAAGGTTACACTTCCAGCAAAAATTCT
TTTGATAGATGATATTTATACCACAGGAGCAACCTTACAACTTGCCAAAGATATTTTAGTGGAAGCGGGTGTGAAAGAAA
TTTTGACATTTTCATTAGCAAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9P4K7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comFC/cflB Streptococcus mitis SK321

47.706

98.643

0.471
  comFC/cflB Streptococcus pneumoniae TIGR4

47.248

98.643

0.466
  comFC/cflB Streptococcus mitis NCTC 12261

47.248

98.643

0.466
  comFC/cflB Streptococcus pneumoniae D39

46.789

98.643

0.462
  comFC/cflB Streptococcus pneumoniae Rx1

46.789

98.643

0.462
  comFC/cflB Streptococcus pneumoniae R6

46.789

98.643

0.462
  comFC Bacillus subtilis subsp. subtilis str. 168

35.242

100

0.362