Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   I6H72_RS04070 Genome accession   NZ_CP066055
Coordinates   826855..827910 (-) Length   351 a.a.
NCBI ID   WP_070669255.1    Uniprot ID   A0A380L396
Organism   Streptococcus constellatus strain FDAARGOS_1015     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 821855..832910
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H72_RS04045 (I6H72_04045) - 823037..823564 (-) 528 WP_006267546.1 Dps family protein -
  I6H72_RS04050 (I6H72_04050) cclA/cilC 823715..824389 (+) 675 WP_020997643.1 prepilin peptidase Machinery gene
  I6H72_RS04055 (I6H72_04055) - 824384..824902 (-) 519 WP_003070167.1 VanZ family protein -
  I6H72_RS04060 (I6H72_04060) rlmN 824895..825977 (-) 1083 WP_049476508.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  I6H72_RS04065 (I6H72_04065) - 826011..826568 (-) 558 WP_003070172.1 YutD family protein -
  I6H72_RS04070 (I6H72_04070) sepM 826855..827910 (-) 1056 WP_070669255.1 SepM family pheromone-processing serine protease Regulator
  I6H72_RS04075 (I6H72_04075) coaD 827891..828388 (-) 498 WP_006267255.1 pantetheine-phosphate adenylyltransferase -
  I6H72_RS04080 (I6H72_04080) rsmD 828378..828917 (-) 540 WP_020997641.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  I6H72_RS04085 (I6H72_04085) hpf 829114..829656 (-) 543 WP_003032381.1 ribosome hibernation-promoting factor, HPF/YfiA family -
  I6H72_RS04090 (I6H72_04090) comFC/cflB 829735..830400 (-) 666 WP_006267632.1 ComF family protein Machinery gene
  I6H72_RS04095 (I6H72_04095) comFA/cflA 830397..831698 (-) 1302 WP_198458343.1 DEAD/DEAH box helicase Machinery gene
  I6H72_RS04100 (I6H72_04100) - 831755..832390 (+) 636 WP_003035211.1 YigZ family protein -

Sequence


Protein


Download         Length: 351 a.a.        Molecular weight: 38315.36 Da        Isoelectric Point: 10.2305

>NTDB_id=453315 I6H72_RS04070 WP_070669255.1 826855..827910(-) (sepM) [Streptococcus constellatus strain FDAARGOS_1015]
MEKSRTKFKKWPIVAVVGLLLLFMSFIVPLPYYIEVPGGAADVRQVLRVDNKVDKEKGSYNFVTVGIQHATFAHLVYAWL
TPFTDIYSAKDLTGGTSDKEYMRINQFYMETSQNLAKYQGLKKAGKDISLKYLGVYVLQVTKNSTFKGILNIADTVTGVN
DKTFNSSKDLIDYVGSQKIGSKVKVNYVEDGQKKSAIGKIIKLENGKNGIGISLIDRTEVTSNIPIEFSTAGIGGPSAGL
MFSLAIYTQIADPTLRDGRNIAGTGSIDREGKVGDIGGIDKKVVSAAKNGAEIFFAPNNPVTKEVKKSNPKAKTNYETAL
AAAKKIKTKMKIVPVKTLQDAIDYLKSTKKS

Nucleotide


Download         Length: 1056 bp        

>NTDB_id=453315 I6H72_RS04070 WP_070669255.1 826855..827910(-) (sepM) [Streptococcus constellatus strain FDAARGOS_1015]
ATGGAAAAATCACGAACTAAATTTAAAAAATGGCCGATAGTGGCTGTAGTAGGGCTGCTTCTACTGTTCATGTCTTTTAT
AGTTCCTCTGCCTTATTACATTGAGGTGCCAGGTGGTGCAGCAGATGTTCGGCAAGTATTACGTGTAGATAATAAAGTGG
ATAAGGAAAAAGGTTCTTATAACTTTGTCACTGTTGGGATTCAGCATGCAACCTTTGCTCATTTGGTTTATGCTTGGTTG
ACTCCTTTTACAGATATTTATTCGGCGAAAGATCTGACTGGCGGAACTTCTGATAAAGAATATATGCGAATCAATCAATT
TTATATGGAAACATCACAAAACTTAGCCAAATATCAAGGGTTAAAAAAAGCAGGCAAGGATATTAGCTTGAAATATTTGG
GTGTTTATGTGTTGCAAGTTACCAAGAATTCAACCTTTAAAGGGATTCTAAATATTGCAGATACTGTGACAGGCGTGAAT
GATAAGACTTTCAACAGTTCAAAAGATTTGATTGATTATGTAGGCTCACAGAAAATTGGCAGCAAGGTCAAGGTGAACTA
TGTAGAAGACGGTCAGAAAAAATCTGCTATAGGTAAAATTATCAAACTTGAAAATGGGAAAAATGGAATTGGTATTAGCT
TAATTGACCGAACAGAAGTCACAAGTAATATACCAATTGAATTTTCAACAGCTGGGATTGGTGGACCAAGTGCGGGTTTA
ATGTTTAGCTTGGCGATTTATACACAGATTGCAGACCCGACATTGAGAGATGGCAGAAATATTGCTGGGACAGGATCGAT
TGACCGTGAAGGAAAAGTTGGTGATATTGGTGGGATTGATAAAAAAGTTGTTTCAGCAGCTAAAAATGGCGCAGAAATTT
TCTTTGCGCCAAATAATCCAGTCACCAAGGAAGTGAAAAAATCCAATCCTAAAGCGAAAACAAACTATGAGACAGCTTTG
GCAGCTGCTAAAAAAATTAAAACTAAAATGAAAATTGTACCTGTCAAGACCTTGCAAGACGCAATTGATTACCTCAAAAG
TACTAAAAAATCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A380L396

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

63.663

98.006

0.624