Detailed information NTG0453282

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: HUF98_RS01525
• Genome accession: NZ_CP054560
• Coordinates: 322971..324029 (+)
• Length: 352 a.a.
• NCBI ID: WP_031951026.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain YC103
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 317971..329029

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUF98_RS01510 (HUF98_01510)	-	319077..319409 (+)	333	WP_000169602.1	DUF7709 family protein	-
HUF98_RS01515 (HUF98_01515)	-	319412..320236 (+)	825	WP_005130721.1	putative RNA methyltransferase	-
HUF98_RS01520 (HUF98_01520)	ponA	320254..322809 (-)	2556	WP_064191519.1	penicillin-binding protein PBP1a	-
HUF98_RS01525 (HUF98_01525)	pilM	322971..324029 (+)	1059	WP_031951026.1	pilus assembly protein PilM	Machinery gene
HUF98_RS01530 (HUF98_01530)	pilN	324029..324670 (+)	642	WP_140951736.1	PilN domain-containing protein	Machinery gene
HUF98_RS01535 (HUF98_01535)	pilO	324667..325407 (+)	741	WP_000076106.1	type 4a pilus biogenesis protein PilO	Machinery gene
HUF98_RS01540 (HUF98_01540)	pilP	325418..325945 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
HUF98_RS01545 (HUF98_01545)	pilQ	326008..328173 (+)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
HUF98_RS01550 (HUF98_01550)	aroK	328185..328754 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39063.60 Da
• Isoelectric Point: 4.4618

>NTDB_id=453282 HUF98_RS01525 WP_031951026.1 322971..324029(+) (pilM) [Acinetobacter baumannii strain YC103]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLQDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=453282 HUF98_RS01525 WP_031951026.1 322971..324029(+) (pilM) [Acinetobacter baumannii strain YC103]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCAGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGTTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.716	100	0.997
comM	Acinetobacter nosocomialis M2	98.864	100	0.989
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423