Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   MS088_RS02085 Genome accession   NZ_CP054472
Coordinates   446313..446720 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain PAAK088     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 441313..451720
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MS088_RS02055 (MS088_02055) - 441361..442365 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  MS088_RS02060 (MS088_02060) pyrR 442389..442901 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  MS088_RS02065 (MS088_02065) ruvX 443013..443447 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  MS088_RS02070 (MS088_02070) - 443447..444016 (-) 570 WP_003100947.1 YqgE/AlgH family protein -
  MS088_RS02075 (MS088_02075) - 444065..444958 (-) 894 WP_194249030.1 energy transducer TonB -
  MS088_RS02080 (MS088_02080) gshB 445105..446058 (-) 954 WP_003100943.1 glutathione synthase -
  MS088_RS02085 (MS088_02085) pilG 446313..446720 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  MS088_RS02090 (MS088_02090) pilH 446767..447132 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  MS088_RS02095 (MS088_02095) - 447183..447719 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  MS088_RS02100 (MS088_02100) pilJ 447804..449852 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  MS088_RS02105 (MS088_02105) pilK 449913..450788 (+) 876 WP_023115713.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=452672 MS088_RS02085 WP_003084583.1 446313..446720(+) (pilG) [Pseudomonas aeruginosa strain PAAK088]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=452672 MS088_RS02085 WP_003084583.1 446313..446720(+) (pilG) [Pseudomonas aeruginosa strain PAAK088]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385