Detailed information NTG0452387

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: JBL37_RS23535
• Genome accession: NZ_CP065948
• Coordinates: 5006243..5007736 (+)
• Length: 497 a.a.
• NCBI ID: WP_003457843.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain PAM68
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5001243..5012736

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JBL37_RS23505 (JBL37_23510)	-	5001364..5002278 (-)	915	WP_033938739.1	fimbrial protein	-
JBL37_RS23510 (JBL37_23515)	sutA	5002715..5003032 (-)	318	WP_003096440.1	transcriptional regulator SutA	-
JBL37_RS23515 (JBL37_23520)	-	5003110..5003535 (-)	426	WP_003096441.1	secondary thiamine-phosphate synthase enzyme YjbQ	-
JBL37_RS23520 (JBL37_23525)	-	5003796..5005124 (-)	1329	WP_003109815.1	ammonium transporter	-
JBL37_RS23525 (JBL37_23530)	glnK	5005164..5005502 (-)	339	WP_003096476.1	P-II family nitrogen regulator	-
JBL37_RS23530 (JBL37_23535)	-	5005942..5006202 (+)	261	WP_003096478.1	accessory factor UbiK family protein	-
JBL37_RS23535 (JBL37_23540)	comM	5006243..5007736 (+)	1494	WP_003457843.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
JBL37_RS23540 (JBL37_23545)	betT	5007861..5009846 (+)	1986	WP_003096496.1	choline BCCT transporter BetT	-
JBL37_RS23545 (JBL37_23550)	pchP	5009889..5010938 (-)	1050	WP_003110458.1	phosphorylcholine phosphatase	-
JBL37_RS23550 (JBL37_23555)	-	5011089..5012006 (-)	918	WP_105248444.1	LysR substrate-binding domain-containing protein	-

Sequence

Protein

• Length: 497 a.a.
• Molecular weight: 53083.02 Da
• Isoelectric Point: 7.9587

>NTDB_id=452387 JBL37_RS23535 WP_003457843.1 5006243..5007736(+) (comM) [Pseudomonas aeruginosa strain PAM68]
MSLAIVHSRAQVGVEAPCVSVEAHLANGLPSLTLVGLPETAVRESKDRVRSALLNAGFDFPARRITLNLAPADLPKDGGR
FDLAIALGILAASGQLPGTALDGLECLGELALSGAIRPVRGVLPAALAARDARRVLVVPKENAEEASLASGLTVFAVDHL
LEIAGHLSGQAPLLPYQARGLLRAPFPYPDLAEVQGQAAAKRALLVAAAGAHNLLLSGPPGTGKTLLASRLPGLLPALDE
DEALEVAAIHSVASHVPLRHWPQRPFRQPHHSASAPALVGGGSRPQPGEITLAHQGVLFLDELPEFERKVLEVLREPLES
GEIVIARANGRVRFPARFQLVAAMNPCPCGYLGDPSGRCRCTPEQVQRYRGKLSGPLLDRIDLHVSVLRESTSLQPGHGE
TATAEISERVGAARQRQLARQGCANAHLDLQAMHRNCALAEADRRWLEAAGERLELSLRALHRILKVARTLADLERIDAI
ERRHLAEALQYRATTST

Nucleotide

• Length: 1494 bp

>NTDB_id=452387 JBL37_RS23535 WP_003457843.1 5006243..5007736(+) (comM) [Pseudomonas aeruginosa strain PAM68]
ATGTCCCTGGCGATTGTCCACAGCCGAGCCCAGGTCGGCGTCGAAGCCCCCTGCGTCAGCGTCGAGGCGCACCTGGCCAA
CGGCCTGCCTTCGCTGACCCTGGTCGGCCTGCCGGAAACCGCGGTGCGCGAGAGCAAGGACCGCGTGCGCAGCGCCCTGC
TCAATGCCGGTTTCGACTTCCCCGCGCGGCGCATCACCCTCAACCTCGCCCCCGCCGACCTACCCAAGGACGGCGGTCGC
TTCGACCTGGCCATCGCACTCGGCATCCTCGCCGCCAGCGGCCAGTTGCCCGGCACCGCCCTCGACGGCCTGGAGTGCCT
CGGCGAACTGGCCCTGTCCGGGGCGATCCGCCCAGTGCGAGGCGTATTGCCGGCCGCGCTGGCGGCGCGCGACGCAAGGC
GCGTTCTGGTGGTACCGAAGGAAAATGCCGAAGAGGCCAGCCTGGCCAGCGGGCTGACGGTGTTCGCCGTGGACCACCTG
CTGGAGATCGCCGGACACCTCTCCGGCCAGGCCCCGCTGCTGCCCTACCAGGCCCGCGGCCTGCTCCGCGCGCCCTTCCC
TTATCCAGACCTGGCCGAGGTCCAGGGCCAGGCCGCCGCCAAGCGCGCCCTGCTGGTGGCCGCCGCCGGCGCGCACAACC
TGTTGCTCAGCGGCCCGCCGGGCACCGGCAAGACCCTCCTGGCCAGCCGCCTGCCCGGCCTGCTGCCGGCGCTCGACGAG
GACGAGGCCCTGGAGGTCGCAGCGATCCATTCGGTGGCCAGCCACGTCCCCCTCAGGCACTGGCCGCAGCGACCGTTCCG
CCAGCCGCACCACTCCGCCTCCGCGCCGGCCCTGGTCGGCGGCGGCAGCCGCCCGCAGCCGGGCGAGATCACCCTGGCGC
ACCAGGGCGTGCTGTTCCTCGACGAACTGCCGGAGTTCGAGCGCAAGGTCCTGGAGGTCCTGCGCGAGCCGCTGGAAAGC
GGCGAGATCGTCATTGCCCGGGCCAACGGCCGGGTACGTTTCCCGGCGCGCTTCCAACTGGTGGCGGCGATGAATCCCTG
TCCCTGTGGCTACCTCGGCGATCCCAGCGGCCGCTGCCGCTGCACCCCGGAACAGGTCCAGCGCTACCGGGGCAAGCTGT
CCGGACCGCTGCTCGATCGCATCGACCTGCACGTCAGCGTGCTCCGCGAAAGCACCAGCCTGCAGCCAGGACACGGCGAA
ACCGCTACCGCCGAGATCAGCGAACGGGTTGGCGCCGCACGGCAACGGCAACTGGCCCGCCAGGGCTGCGCCAATGCCCA
TCTCGACCTCCAGGCGATGCACCGCAATTGTGCACTCGCCGAAGCGGACCGCCGCTGGCTGGAGGCTGCCGGAGAGCGCC
TGGAACTTTCCTTGCGCGCCTTGCATCGCATACTCAAGGTGGCCCGGACGCTGGCCGACCTGGAGCGCATCGATGCCATC
GAACGCCGGCACCTGGCGGAAGCCCTGCAGTATCGGGCAACGACCTCCACGTGA

Domains

Predicted by InterProScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-390)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-492)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio campbellii strain DS40M4	56.452	99.799	0.563
comM	Haemophilus influenzae Rd KW20	55.467	100	0.561
comM	Vibrio cholerae O1 biovar El Tor strain E7946	56.048	99.799	0.559
comM	Vibrio cholerae strain A1552	56.048	99.799	0.559
comM	Glaesserella parasuis strain SC1401	54.691	100	0.551
comM	Acinetobacter baylyi ADP1	53.414	100	0.535
comM	Legionella pneumophila str. Paris	49.901	100	0.507
comM	Legionella pneumophila strain ERS1305867	49.901	100	0.507
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.154	100	0.471
comM	Helicobacter pylori 26695	39.044	100	0.394