Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   JAN99_RS03560 Genome accession   NZ_CP065927
Coordinates   692204..692386 (+) Length   60 a.a.
NCBI ID   WP_011017964.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm9ST603     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 687204..697386
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JAN99_RS03535 (JAN99_03530) - 687566..688207 (+) 642 Protein_639 CHAP domain-containing protein -
  JAN99_RS03540 (JAN99_03535) - 688347..688871 (+) 525 WP_011017840.1 type II toxin-antitoxin system antitoxin SocA domain-containing protein -
  JAN99_RS03545 (JAN99_03540) - 688859..689725 (+) 867 WP_136022508.1 DUF334 domain-containing protein -
  JAN99_RS03550 (JAN99_03545) spek 690028..690807 (+) 780 WP_011054728.1 streptococcal pyrogenic exotoxin SpeK -
  JAN99_RS03555 (JAN99_03550) - 691283..691858 (+) 576 WP_011054727.1 hypothetical protein -
  JAN99_RS09110 - 691852..692139 (+) 288 WP_011106694.1 hypothetical protein -
  JAN99_RS03560 (JAN99_03555) prx 692204..692386 (+) 183 WP_011017964.1 hypothetical protein Regulator
  JAN99_RS03570 (JAN99_03565) - 694138..696000 (+) 1863 WP_111693292.1 heavy metal translocating P-type ATPase -
  JAN99_RS03575 (JAN99_03570) - 696300..697235 (-) 936 WP_111693291.1 dihydroorotate oxidase -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6841.79 Da        Isoelectric Point: 4.5183

>NTDB_id=452026 JAN99_RS03560 WP_011017964.1 692204..692386(+) (prx) [Streptococcus pyogenes strain emm9ST603]
MLTYDEFKQAIDNGYIAGDTVAIVRKDGQIFDYVLPHEKVKNGEVVTKEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=452026 JAN99_RS03560 WP_011017964.1 692204..692386(+) (prx) [Streptococcus pyogenes strain emm9ST603]
ATGCTAACATACGACGAGTTTAAGCAAGCGATTGACAATGGATATATCGCAGGCGATACAGTAGCGATCGTGCGTAAAGA
CGGACAGATTTTTGATTATGTGTTGCCACATGAGAAAGTAAAGAATGGAGAAGTTGTGACTAAGGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

100

100

1
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

73.333

100

0.733
  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617
  prx Streptococcus pyogenes MGAS315

83.721

71.667

0.6
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55