Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   HRE60_RS00960 Genome accession   NZ_CP054153
Coordinates   178806..180068 (+) Length   420 a.a.
NCBI ID   WP_002883638.1    Uniprot ID   A0AB33ZGQ4
Organism   Streptococcus salivarius strain DB-B5     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 173806..185068
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HRE60_RS00935 (HRE60_00935) - 174191..175768 (+) 1578 WP_181670880.1 ABC transporter ATP-binding protein -
  HRE60_RS00940 (HRE60_00940) - 175924..176640 (+) 717 WP_002883635.1 YebC/PmpR family DNA-binding transcriptional regulator -
  HRE60_RS00945 (HRE60_00945) - 176766..177104 (+) 339 WP_037610709.1 preprotein translocase subunit YajC -
  HRE60_RS00950 (HRE60_00950) - 177233..177982 (+) 750 WP_002886457.1 isoprenyl transferase -
  HRE60_RS00955 (HRE60_00955) - 177995..178789 (+) 795 WP_181670881.1 phosphatidate cytidylyltransferase -
  HRE60_RS00960 (HRE60_00960) eeP 178806..180068 (+) 1263 WP_002883638.1 RIP metalloprotease RseP Regulator
  HRE60_RS00965 (HRE60_00965) - 180139..182001 (+) 1863 WP_096832809.1 proline--tRNA ligase -
  HRE60_RS00970 (HRE60_00970) - 182483..184423 (+) 1941 WP_181670882.1 ABC transporter substrate binding protein -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45824.16 Da        Isoelectric Point: 5.8010

>NTDB_id=451146 HRE60_RS00960 WP_002883638.1 178806..180068(+) (eeP) [Streptococcus salivarius strain DB-B5]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKT
GSPASLTIGSDGKVRRINLSDRQVDQTALPMNVTAYDLEDKLTITGLVLDETKTYEVDHDATIVEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDTSTNRIQVADGGAAQVAGLKNGDAIEAINKDKVTDWDSLKE
ALTENTQKFSKGDSLSVTVKRSNGQEETISVKPQENQGSYFLGVSPALKTSLKDKIFGGFQMAWEGAFKILVALKGLITN
FSLNKLGGPVAMFQMSAQASENGLISILNLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGV
AIMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=451146 HRE60_RS00960 WP_002883638.1 178806..180068(+) (eeP) [Streptococcus salivarius strain DB-B5]
ATGAAAGCTATTATTACCTTTTTACTGATTTTCTGTGTGATTGTCGTCTTCCATGAGTTTGGTCATTTCTTTTTCGCCAA
ACGCTCAGGAATTTTGGTTCGTGAATTTGCCATTGGTATGGGACCGAAAATTTTTGCACATACAGGTAAGGATGGTACCG
TTTATACTATTCGCATCCTCCCTTTGGGTGGTTATGTCCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAACA
GGTAGCCCTGCCAGTCTAACGATTGGATCAGATGGTAAGGTAAGACGTATCAACCTTTCGGATCGCCAGGTTGACCAGAC
GGCTTTGCCTATGAACGTCACTGCCTATGATTTGGAAGATAAGTTAACCATTACAGGTCTAGTCCTAGATGAGACCAAGA
CCTATGAGGTTGATCATGATGCCACTATCGTTGAGGAGGATGGTACAGAACTTCGTATCGCTCCTAAGGATGTCCAATAT
CAAAATGCAAGCATTTGGGGACGTTTAATTACCAACTTTGCTGGTCCTATGAATAACTTCATTCTTGGGGTGCTTGTCTT
TATTATCTTAGCCTTTGTTCAAGGTGGTGTTCAAGATACATCGACCAACCGTATCCAGGTAGCCGATGGAGGTGCTGCTC
AGGTGGCAGGCTTAAAAAATGGTGATGCCATCGAGGCTATCAATAAGGACAAGGTTACTGATTGGGACAGTTTGAAGGAA
GCATTGACAGAGAATACCCAAAAATTCTCCAAAGGTGACAGCCTTTCTGTGACAGTTAAGAGAAGTAACGGTCAGGAAGA
AACAATCTCTGTTAAACCTCAGGAGAACCAAGGTAGCTATTTTTTGGGTGTTTCTCCTGCTTTAAAAACAAGTCTTAAGG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGGGCCTTCAAAATTCTCGTAGCACTTAAAGGGCTTATCACCAAC
TTTAGTTTGAATAAACTTGGTGGACCGGTTGCTATGTTCCAGATGTCTGCCCAGGCTTCAGAAAATGGCTTGATTTCCAT
TCTTAACCTTATGGGGATGCTCTCAATTAACTTGGGAATTTTCAATCTTATCCCAATTCCAGCCCTTGACGGTGGAAAAA
TTGTTATGAATATTATTGAAGCCATTCGTCGTAAACCACTTAATCAAGAAATTGAAAGCTATATTACACTTGCAGGTGTT
GCTATCATGGTTGTTCTTATGATTGCAGTCACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains


Predicted by InterproScan.

(205-272)

(6-406)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

95.476

100

0.955

  eeP Streptococcus thermophilus LMG 18311

95.238

100

0.952