Detailed information NTG0449982

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: FOC71_RS00720
• Genome accession: NZ_CP053999
• Coordinates: 142090..142527 (-)
• Length: 145 a.a.
• NCBI ID: WP_003073990.1
• Uniprot ID: -
• Organism: Streptococcus intermedius strain FDAARGOS_769
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 137090..147527

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC71_RS00700 (FOC71_00700)	glmS	137297..139111 (-)	1815	WP_003073998.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
FOC71_RS00705 (FOC71_00705)	-	139493..140692 (-)	1200	WP_003073996.1	acetate kinase	-
FOC71_RS00710 (FOC71_00710)	comYH	140739..141692 (-)	954	WP_003073994.1	class I SAM-dependent methyltransferase	Machinery gene
FOC71_RS00715 (FOC71_00715)	comGG	141783..142109 (-)	327	WP_268928556.1	competence type IV pilus minor pilin ComGG	-
FOC71_RS00720 (FOC71_00720)	comGF/cglF	142090..142527 (-)	438	WP_003073990.1	competence type IV pilus minor pilin ComGF	Machinery gene
FOC71_RS00725 (FOC71_00725)	comGE/cglE	142511..142804 (-)	294	WP_003073987.1	competence type IV pilus minor pilin ComGE	Machinery gene
FOC71_RS00730 (FOC71_00730)	comYD	142776..143174 (-)	399	WP_260469249.1	competence type IV pilus minor pilin ComGD	Machinery gene
FOC71_RS00735 (FOC71_00735)	comYC	143164..143481 (-)	318	WP_003073983.1	competence type IV pilus major pilin ComGC	Machinery gene
FOC71_RS00740 (FOC71_00740)	comYB	143478..144500 (-)	1023	WP_172851983.1	competence type IV pilus assembly protein ComGB	Machinery gene
FOC71_RS00745 (FOC71_00745)	comYA	144442..145383 (-)	942	WP_003073980.1	competence type IV pilus ATPase ComGA	Machinery gene
FOC71_RS00750 (FOC71_00750)	-	145452..145817 (-)	366	WP_003073978.1	DUF1033 family protein	-
FOC71_RS00755 (FOC71_00755)	glnA	146005..147351 (-)	1347	WP_003073975.1	type I glutamate--ammonia ligase	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16858.51 Da
• Isoelectric Point: 10.2149

>NTDB_id=449982 FOC71_RS00720 WP_003073990.1 142090..142527(-) (comGF/cglF) [Streptococcus intermedius strain FDAARGOS_769]
MFKANKVKAFTLLEALIALFVLSGSVLLFQSMTRLLASEVQTRQHSEQREWLLFADQLEVELTRSSFEKVENNRLYMKQD
GKVIAFGKASGQDFRKTNANGKGYQPMVYDVKKAEISQENELVRIRLLFKRGLEREFIYRVETKS

Nucleotide

• Length: 438 bp

>NTDB_id=449982 FOC71_RS00720 WP_003073990.1 142090..142527(-) (comGF/cglF) [Streptococcus intermedius strain FDAARGOS_769]
GTGTTCAAAGCAAATAAAGTAAAAGCTTTTACACTTTTAGAGGCTCTGATTGCCCTATTCGTACTCAGTGGAAGTGTGTT
GCTATTTCAATCTATGACGCGTCTTCTGGCTTCTGAAGTCCAAACTCGACAACACAGTGAACAGCGAGAATGGCTTTTGT
TTGCCGATCAACTAGAAGTGGAGTTGACGCGTTCTTCATTTGAAAAAGTGGAGAATAATCGTTTATACATGAAGCAAGAT
GGTAAGGTAATTGCATTTGGAAAAGCAAGTGGACAAGATTTCAGGAAAACCAATGCGAATGGGAAAGGTTATCAGCCCAT
GGTTTATGATGTGAAAAAAGCAGAAATTTCACAGGAAAATGAGCTGGTTCGTATTCGATTACTGTTTAAGAGAGGATTGG
AAAGGGAATTCATCTATCGTGTGGAAACAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (38-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae R6	68.571	96.552	0.662
comGF/cglF	Streptococcus pneumoniae TIGR4	68.571	96.552	0.662
comGF/cglF	Streptococcus pneumoniae Rx1	68.571	96.552	0.662
comGF/cglF	Streptococcus pneumoniae D39	68.571	96.552	0.662
comGF/cglF	Streptococcus mitis NCTC 12261	67.857	96.552	0.655
comGF/cglF	Streptococcus mitis SK321	67.857	96.552	0.655
comYF	Streptococcus mutans UA159	41.135	97.241	0.4
comYF	Streptococcus mutans UA140	41.135	97.241	0.4
comGF	Lactococcus lactis subsp. cremoris KW2	42.963	93.103	0.4