Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | I5367_RS07540 | Genome accession | NZ_CP065539 |
| Coordinates | 1484114..1485136 (+) | Length | 340 a.a. |
| NCBI ID | WP_012117493.1 | Uniprot ID | A7Z4C8 |
| Organism | Bacillus amyloliquefaciens strain DGL1 | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1479114..1490136
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I5367_RS07505 (I5367_07505) | - | 1479473..1479712 (+) | 240 | WP_003154475.1 | YlbE-like family protein | - |
| I5367_RS07510 (I5367_07510) | ylbF | 1479783..1480232 (+) | 450 | WP_003154472.1 | YlbF family regulator | Regulator |
| I5367_RS07515 (I5367_07515) | - | 1480291..1480563 (+) | 273 | WP_003154470.1 | YlbG family protein | - |
| I5367_RS07520 (I5367_07520) | rsmD | 1480863..1481417 (+) | 555 | WP_007409693.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| I5367_RS07525 (I5367_07525) | coaD | 1481422..1481904 (+) | 483 | WP_007409694.1 | pantetheine-phosphate adenylyltransferase | - |
| I5367_RS07530 (I5367_07530) | ylbJ | 1481923..1483149 (-) | 1227 | WP_012117492.1 | sporulation integral membrane protein YlbJ | - |
| I5367_RS07535 (I5367_07535) | - | 1483329..1484108 (+) | 780 | WP_007409696.1 | patatin family protein | - |
| I5367_RS07540 (I5367_07540) | sepM | 1484114..1485136 (+) | 1023 | WP_012117493.1 | SepM family pheromone-processing serine protease | Regulator |
| I5367_RS07545 (I5367_07545) | - | 1485155..1486402 (-) | 1248 | WP_012117494.1 | nucleotidyltransferase | - |
| I5367_RS07550 (I5367_07550) | - | 1486611..1487129 (+) | 519 | WP_012117495.1 | YceD family protein | - |
| I5367_RS07555 (I5367_07555) | rpmF | 1487151..1487330 (+) | 180 | WP_003154457.1 | 50S ribosomal protein L32 | - |
| I5367_RS07560 (I5367_07560) | gerR | 1487489..1488064 (+) | 576 | WP_012117496.1 | sporulation-specific transcriptional regulator GerR | - |
| I5367_RS07565 (I5367_07565) | - | 1488104..1488586 (-) | 483 | WP_012117497.1 | N-acetyltransferase | - |
| I5367_RS07570 (I5367_07570) | - | 1488749..1489630 (+) | 882 | WP_012117498.1 | 2-dehydropantoate 2-reductase | - |
Sequence
Protein
Download Length: 340 a.a. Molecular weight: 37434.97 Da Isoelectric Point: 7.3836
>NTDB_id=449981 I5367_RS07540 WP_012117493.1 1484114..1485136(+) (sepM) [Bacillus amyloliquefaciens strain DGL1]
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYDEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIYASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTVDIVLKSFPDDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYDEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIYASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTVDIVLKSFPDDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST
Nucleotide
Download Length: 1023 bp
>NTDB_id=449981 I5367_RS07540 WP_012117493.1 1484114..1485136(+) (sepM) [Bacillus amyloliquefaciens strain DGL1]
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATCGCTGTTACATTTATTAAGCTTCCGTATTA
CATCACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCTGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTATGATGAAATCGTC
CCTGACGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGAATTTATGCCAGCTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGTGATAAAATCATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCAGGGGAAAAAGTAACGTTTCACATTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGACGACCCGAAAAGAGCGGGAATCGGTGTCGCATTATATACGGACC
GGAACGTGAAAGTGAAGCCGGATCTTCATTTCAGCATTGAAAACATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAACCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGGACAATCGACGTGGACGG
CAAAGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCGCCGA
ATCAAAACGGGGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACGGCGAAAGCAATCAAGTCCGATATGAAAATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATCGCTGTTACATTTATTAAGCTTCCGTATTA
CATCACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCTGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTATGATGAAATCGTC
CCTGACGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGAATTTATGCCAGCTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGTGATAAAATCATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCAGGGGAAAAAGTAACGTTTCACATTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGACGACCCGAAAAGAGCGGGAATCGGTGTCGCATTATATACGGACC
GGAACGTGAAAGTGAAGCCGGATCTTCATTTCAGCATTGAAAACATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAACCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGGACAATCGACGTGGACGG
CAAAGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCGCCGA
ATCAAAACGGGGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACGGCGAAAGCAATCAAGTCCGATATGAAAATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
38.953 |
100 |
0.394 |