Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   STCNRZ385_RS04690 Genome accession   NZ_CP065495
Coordinates   896641..896859 (+) Length   72 a.a.
NCBI ID   WP_011681105.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CNRZ385     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 891641..901859
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ385_RS04670 (STCNRZ385_04635) - 892281..893939 (-) 1659 WP_180483585.1 NFACT family protein -
  STCNRZ385_RS04675 (STCNRZ385_04640) - 894262..895218 (+) 957 WP_014727508.1 DUF6994 family protein -
  STCNRZ385_RS04680 (STCNRZ385_04645) - 895524..896009 (+) 486 WP_014607832.1 NUDIX hydrolase -
  STCNRZ385_RS04685 (STCNRZ385_04650) - 896013..896204 (+) 192 WP_011681104.1 hypothetical protein -
  STCNRZ385_RS04690 prx 896641..896859 (+) 219 WP_011681105.1 hypothetical protein Regulator
  STCNRZ385_RS04695 (STCNRZ385_04655) - 897061..897729 (+) 669 WP_014621543.1 TraX family protein -
  STCNRZ385_RS04700 (STCNRZ385_04660) - 897733..897954 (+) 222 WP_224102972.1 conjugal transfer protein TraX -
  STCNRZ385_RS04705 (STCNRZ385_04665) - 897996..898544 (+) 549 WP_014608278.1 DJ-1 family glyoxalase III -
  STCNRZ385_RS04710 (STCNRZ385_04670) - 898601..898816 (-) 216 WP_011681107.1 hypothetical protein -
  STCNRZ385_RS04715 (STCNRZ385_04675) - 898815..899588 (+) 774 WP_011681108.1 dihydroorotate dehydrogenase electron transfer subunit -
  STCNRZ385_RS04720 (STCNRZ385_04680) - 899607..900554 (+) 948 WP_024704100.1 dihydroorotate dehydrogenase -
  STCNRZ385_RS04725 (STCNRZ385_04685) cas1 900693..901697 (+) 1005 WP_014727507.1 CRISPR-associated endonuclease Cas1 -

Sequence

Protein


Download         Length: 72 a.a.        Molecular weight: 8147.18 Da        Isoelectric Point: 4.4665

>NTDB_id=449145 STCNRZ385_RS04690 WP_011681105.1 896641..896859(+) (prx) [Streptococcus thermophilus strain CNRZ385]
MNSIGKENNIILTYDEFKEAMDNGFIKGDTVQIVRKNGKIHDYVLDGERVEPHEILSLEKVSDIIKELGGDN

Nucleotide


Download         Length: 219 bp        

>NTDB_id=449145 STCNRZ385_RS04690 WP_011681105.1 896641..896859(+) (prx) [Streptococcus thermophilus strain CNRZ385]
ATGAATAGCATAGGAAAGGAGAATAATATAATACTAACCTATGATGAATTTAAAGAGGCTATGGACAACGGTTTTATTAA
AGGTGATACTGTCCAGATTGTCCGAAAGAATGGTAAGATCCATGACTACGTTTTAGACGGTGAACGAGTTGAGCCACACG
AAATATTGAGCTTAGAAAAGGTATCGGATATAATAAAAGAACTAGGCGGAGACAACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

58.621

80.556

0.472
  prx Streptococcus pyogenes MGAS8232

57.627

81.944

0.472
  prx Streptococcus pyogenes MGAS315

55.932

81.944

0.458
  prx Streptococcus pyogenes MGAS315

55.172

80.556

0.444
  prx Streptococcus pyogenes MGAS315

73.81

58.333

0.431
  prx Streptococcus pyogenes MGAS315

65.909

61.111

0.403
  prx Streptococcus pyogenes MGAS315

68.293

56.944

0.389