Detailed information NTG0448780

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: STCNRZ1575_RS08910
• Genome accession: NZ_CP065490
• Coordinates: 1708151..1708579 (-)
• Length: 142 a.a.
• NCBI ID: WP_253269448.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain CNRZ1575
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1703151..1713579

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STCNRZ1575_RS08865 (STCNRZ1575_08825)	-	1703288..1703731 (-)	444	WP_011681680.1	hypothetical protein	-
STCNRZ1575_RS08870	-	1703805..1704143 (-)	339	WP_224103197.1	CPBP family intramembrane glutamic endopeptidase	-
STCNRZ1575_RS08875	-	1704187..1704462 (-)	276	WP_011681681.1	hypothetical protein	-
STCNRZ1575_RS08880 (STCNRZ1575_08835)	-	1704474..1704671 (-)	198	WP_011681682.1	helix-turn-helix transcriptional regulator	-
STCNRZ1575_RS08885 (STCNRZ1575_08840)	-	1704920..1706113 (-)	1194	WP_014608740.1	acetate kinase	-
STCNRZ1575_RS08890 (STCNRZ1575_08845)	comGH	1706169..1707125 (-)	957	WP_011226622.1	class I SAM-dependent methyltransferase	Machinery gene
STCNRZ1575_RS08895 (STCNRZ1575_08850)	comGG	1707170..1707487 (-)	318	WP_082309152.1	competence type IV pilus minor pilin ComGG	Machinery gene
STCNRZ1575_RS08900 (STCNRZ1575_08855)	comGF	1707465..1707902 (-)	438	WP_082309153.1	competence type IV pilus minor pilin ComGF	Machinery gene
STCNRZ1575_RS08905 (STCNRZ1575_08860)	comGE	1707886..1708179 (-)	294	WP_082309154.1	competence type IV pilus minor pilin ComGE	Machinery gene
STCNRZ1575_RS08910 (STCNRZ1575_08865)	comGD	1708151..1708579 (-)	429	WP_253269448.1	competence type IV pilus minor pilin ComGD	Machinery gene
STCNRZ1575_RS08915 (STCNRZ1575_08870)	comGC	1708539..1708865 (-)	327	WP_002946126.1	competence type IV pilus major pilin ComGC	Machinery gene
STCNRZ1575_RS08920 (STCNRZ1575_08875)	comGB	1708862..1709962 (-)	1101	WP_120764773.1	competence type IV pilus assembly protein ComGB	Machinery gene
STCNRZ1575_RS08925 (STCNRZ1575_08880)	comGA	1709844..1710785 (-)	942	WP_084829888.1	competence type IV pilus ATPase ComGA	Machinery gene
STCNRZ1575_RS08930 (STCNRZ1575_08885)	-	1710866..1711228 (-)	363	WP_011226630.1	DUF1033 family protein	-

Sequence

Protein

• Length: 142 a.a.
• Molecular weight: 15829.42 Da
• Isoelectric Point: 10.3330

>NTDB_id=448780 STCNRZ1575_RS08910 WP_253269448.1 1708151..1708579(-) (comGD) [Streptococcus thermophilus strain CNRZ1575]
MRNMVVKAAQWPIRAFTLLESLMTLAVVVFLTLSLSGSVTGIFQQVEINLFYLRFEYLYRDSQRLASAEGSNVELQLTKD
KVGNGRSSLLIPKSIHLDKGQTLVFDAKGGNSSLTKIRFSSDKEVVTYLLNMGSGKYKKTIS

Nucleotide

• Length: 429 bp

>NTDB_id=448780 STCNRZ1575_RS08910 WP_253269448.1 1708151..1708579(-) (comGD) [Streptococcus thermophilus strain CNRZ1575]
ATGCGAAACATGGTGGTGAAAGCCGCTCAGTGGCCAATTAGAGCTTTCACCTTGTTGGAGAGCCTGATGACACTAGCAGT
GGTTGTCTTTCTCACTCTGAGTTTGTCAGGCTCAGTCACAGGTATTTTTCAGCAGGTCGAGATTAATCTTTTTTATCTGC
GTTTTGAGTACCTATATCGAGATAGTCAGCGCTTGGCATCAGCGGAAGGATCTAATGTTGAATTGCAGTTAACTAAGGAT
AAGGTTGGTAATGGAAGGTCTAGTCTGCTTATTCCTAAAAGTATTCATCTGGATAAGGGGCAGACGCTAGTGTTTGATGC
TAAAGGGGGCAACTCTAGCCTCACGAAAATTCGTTTTTCAAGTGATAAGGAGGTGGTGACCTATCTGCTTAACATGGGCA
GTGGTAAATATAAAAAGACGATCTCTTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Streptococcus mutans UA140	51.908	92.254	0.479
comGD	Streptococcus mutans UA159	51.908	92.254	0.479
comGD	Streptococcus gordonii str. Challis substr. CH1	40.714	98.592	0.401
comGD/cglD	Streptococcus pneumoniae Rx1	43.307	89.437	0.387
comGD/cglD	Streptococcus pneumoniae D39	43.307	89.437	0.387
comGD/cglD	Streptococcus pneumoniae R6	43.307	89.437	0.387
comGD/cglD	Streptococcus mitis NCTC 12261	43.307	89.437	0.387
comGD/cglD	Streptococcus pneumoniae TIGR4	43.307	89.437	0.387
comGD/cglD	Streptococcus mitis SK321	42.52	89.437	0.38
comGD	Lactococcus lactis subsp. cremoris KW2	40.909	92.958	0.38