Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   STMM1_RS04845 Genome accession   NZ_CP065484
Coordinates   915839..916057 (-) Length   72 a.a.
NCBI ID   WP_071417342.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain MM1     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 910839..921057
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STMM1_RS04815 (STMM1_04815) cas1 911001..912005 (-) 1005 WP_014727507.1 CRISPR-associated endonuclease Cas1 -
  STMM1_RS04820 (STMM1_04820) - 912144..913091 (-) 948 WP_071417339.1 dihydroorotate dehydrogenase -
  STMM1_RS04825 (STMM1_04825) - 913110..913883 (-) 774 WP_011681108.1 dihydroorotate dehydrogenase electron transfer subunit -
  STMM1_RS04830 (STMM1_04830) - 913882..914097 (+) 216 WP_011681107.1 hypothetical protein -
  STMM1_RS04835 (STMM1_04835) - 914154..914702 (-) 549 WP_071417340.1 DJ-1 family glyoxalase III -
  STMM1_RS04840 (STMM1_04845) - 914969..915637 (-) 669 WP_071417341.1 TraX family protein -
  STMM1_RS04845 prx 915839..916057 (-) 219 WP_071417342.1 hypothetical protein Regulator
  STMM1_RS04850 (STMM1_04850) - 916494..916685 (-) 192 WP_011681104.1 hypothetical protein -
  STMM1_RS04855 (STMM1_04855) - 916689..917174 (-) 486 WP_014607832.1 NUDIX domain-containing protein -
  STMM1_RS04860 (STMM1_04860) - 917480..918436 (-) 957 WP_257608445.1 hypothetical protein -
  STMM1_RS04865 (STMM1_04865) - 918759..920417 (+) 1659 WP_014608275.1 NFACT RNA binding domain-containing protein -

Sequence

Protein


Download         Length: 72 a.a.        Molecular weight: 8133.11 Da        Isoelectric Point: 4.3304

>NTDB_id=448112 STMM1_RS04845 WP_071417342.1 915839..916057(-) (prx) [Streptococcus thermophilus strain MM1]
MNSIGKENNIILTYDEFKEAMDNGFIKGDTVQIVRKNGNIHDYVLDGERVEPHEILSLEKVSDIIKELGGDN

Nucleotide


Download         Length: 219 bp        

>NTDB_id=448112 STMM1_RS04845 WP_071417342.1 915839..916057(-) (prx) [Streptococcus thermophilus strain MM1]
ATGAATAGCATAGGAAAGGAGAATAATATAATACTAACCTATGATGAATTTAAAGAGGCTATGGACAACGGTTTTATTAA
AGGTGATACTGTCCAGATTGTCCGAAAGAATGGTAATATCCATGACTACGTTTTAGACGGTGAACGAGTTGAGCCACACG
AAATATTGAGCTTAGAAAAGGTATCGGATATAATAAAAGAACTAGGCGGAGACAACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

58.621

80.556

0.472
  prx Streptococcus pyogenes MGAS8232

57.627

81.944

0.472
  prx Streptococcus pyogenes MGAS315

55.932

81.944

0.458
  prx Streptococcus pyogenes MGAS315

55.172

80.556

0.444
  prx Streptococcus pyogenes MGAS315

73.81

58.333

0.431
  prx Streptococcus pyogenes MGAS315

65.909

61.111

0.403
  prx Streptococcus pyogenes MGAS315

65.854

56.944

0.375