Detailed information NTG0447170

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: GE023_RS07700
• Genome accession: NZ_CP053789
• Coordinates: 1554906..1555496 (-)
• Length: 196 a.a.
• NCBI ID: WP_093998442.1
• Uniprot ID: -
• Organism: Streptococcus canis strain HL_98_2
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1549906..1560496

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GE023_RS07665 (GE023_007660)	yabA	1550502..1550825 (-)	324	WP_003046904.1	DNA replication initiation control protein YabA	-
GE023_RS07670 (GE023_007665)	ricT	1550818..1551618 (-)	801	WP_093998440.1	regulatory iron-sulfur-containing complex subunit RicT	-
GE023_RS07675 (GE023_007670)	-	1551615..1552487 (-)	873	WP_003046898.1	DNA polymerase III subunit delta'	-
GE023_RS07680 (GE023_007675)	tmk	1552503..1553138 (-)	636	WP_093998441.1	dTMP kinase	-
GE023_RS10985	-	1553492..1553632 (-)	141	WP_232038563.1	hypothetical protein	-
GE023_RS07690 (GE023_007685)	-	1553884..1554171 (-)	288	WP_003046884.1	YlbG family protein	-
GE023_RS07695 (GE023_007690)	-	1554171..1554617 (-)	447	WP_159305789.1	YlbF family regulator	-
GE023_RS07700 (GE023_007695)	clpP	1554906..1555496 (-)	591	WP_093998442.1	ATP-dependent Clp protease proteolytic subunit	Regulator
GE023_RS07705 (GE023_007700)	upp	1555717..1556346 (-)	630	WP_003046872.1	uracil phosphoribosyltransferase	-
GE023_RS07710 (GE023_007705)	-	1556546..1558180 (-)	1635	WP_164401472.1	polysaccharide biosynthesis protein	-
GE023_RS07715 (GE023_007710)	-	1558268..1559713 (+)	1446	WP_003046866.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21634.85 Da
• Isoelectric Point: 5.2834

>NTDB_id=447170 GE023_RS07700 WP_093998442.1 1554906..1555496(-) (clpP) [Streptococcus canis strain HL_98_2]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQVHKDAERDYWMSAEETLAYGFIDEIMENNELK

Nucleotide

• Length: 591 bp

>NTDB_id=447170 GE023_RS07700 WP_093998442.1 1554906..1555496(-) (clpP) [Streptococcus canis strain HL_98_2]
ATGATTCCTGTTGTTATTGAACAAACCAGTCGTGGCGAACGTTCTTACGACATTTATTCACGCTTGTTAAAAGACCGTAT
CATCATGTTGACAGGTCCTGTTGAAGATAATATGGCAAATTCTGTCATTGCGCAGCTTTTATTCCTTGATGCTCAAGACA
ATACGAAAGATATTTATTTATATGTCAATACACCTGGTGGCTCTGTCTCAGCGGGTTTGGCTATTGTAGACACTATGAAC
TTTATCAAGGCTGATGTTCAGACTATTGTGATGGGGATGGCGGCTTCTATGGGGACTGTCATTGCTTCATCAGGAACTAA
AGGCAAGCGCTTTATGTTACCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACAGGTGGTGGCACACAACAAA
CGGATATGGCTATTGCGGCAGAGCACCTCTTGAAAACACGTCACCGTTTAGAAAAAATCTTGGCACAAAATGCTGGAAAA
ACCATTAAACAAGTTCACAAAGATGCTGAACGTGACTATTGGATGAGTGCCGAAGAAACCTTAGCTTATGGTTTTATTGA
CGAGATTATGGAAAACAACGAATTAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes JRS4	99.49	100	0.995
clpP	Streptococcus pyogenes MGAS315	99.49	100	0.995
clpP	Streptococcus pneumoniae Rx1	91.282	99.49	0.908
clpP	Streptococcus pneumoniae D39	91.282	99.49	0.908
clpP	Streptococcus pneumoniae R6	91.282	99.49	0.908
clpP	Streptococcus pneumoniae TIGR4	91.282	99.49	0.908
clpP	Streptococcus thermophilus LMG 18311	90.306	100	0.903
clpP	Streptococcus thermophilus LMD-9	90.306	100	0.903
clpP	Streptococcus mutans UA159	90.306	100	0.903
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.714	100	0.857
clpP	Lactococcus lactis subsp. cremoris KW2	85.204	100	0.852
clpP	Bacillus subtilis subsp. subtilis str. 168	56.633	100	0.566
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.477	98.469	0.556