Detailed information NTG0444674

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: HLV59_RS01535
• Genome accession: NZ_CP053391
• Coordinates: 323034..325199 (+)
• Length: 721 a.a.
• NCBI ID: WP_171429190.1
• Uniprot ID: -
• Organism: Acinetobacter lactucae isolate QL-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 318034..330199

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HLV59_RS01515	pilM	319957..321015 (+)	1059	WP_016143662.1	pilus assembly protein PilM	Machinery gene
HLV59_RS01520	pilN	321015..321656 (+)	642	WP_016143661.1	PilN domain-containing protein	Machinery gene
HLV59_RS01525	pilO	321653..322432 (+)	780	WP_061875199.1	type 4a pilus biogenesis protein PilO	Machinery gene
HLV59_RS01530	pilP	322444..322971 (+)	528	WP_171429189.1	pilus assembly protein PilP	Machinery gene
HLV59_RS01535	pilQ	323034..325199 (+)	2166	WP_171429190.1	type IV pilus secretin PilQ	Machinery gene
HLV59_RS01540	aroK	325211..325780 (+)	570	WP_016142884.1	shikimate kinase AroK	-
HLV59_RS01545	aroB	325809..326891 (+)	1083	WP_171429192.1	3-dehydroquinate synthase	-
HLV59_RS01550	-	326908..327789 (+)	882	WP_171429194.1	hypothetical protein	-

Sequence

Protein

• Length: 721 a.a.
• Molecular weight: 77993.52 Da
• Isoelectric Point: 6.3481

>NTDB_id=444674 HLV59_RS01535 WP_171429190.1 323034..325199(+) (pilQ) [Acinetobacter lactucae isolate QL-1]
MNHVFSQFSMGAVAIAIMQVASAQVSMTNIVPTQIAGQGTEIRVMFNGLPPQPQAYQLENPSRLILDFNKAQQNLTQTKV
AIGTNEASSVDVSSDDQRSRLTVNLKEAGAFTTRIEGNTFILKINTAQAIVKPAQTSVMQLQGVLNIGFQRGGQGEGLIV
IDLLGSNTPVDVQQQGSKVVVKTLGSKIPAHLAKRLNVNDFATPVSTIESYNEKGNGVITIQSTGSYEYMAYQAENKLTI
SLKRPQDKNVTSLYKTPNYSGNKLSLDFQDIEVRRVLQLLADFTGINMVAADSVQGNITLRLKDVPWDQALDIILKTKNL
DKRRNGNVIWIAPVTELIKAEEEEAKAVAQSVKLAPLQTEYIQLKYARAQDIMSLVTKGSNNSNGLQSTSGGGTSTSTNL
NTGVDSLGNNVGSLLSPRGTITQDDRTNTLIINDTAQSIDQIRKMIDLLDVQVKQVMVEARIVRASTSFTKELGVKWGIL
SQGITNNNNLLVGGSETTLWNLREPKKDETTGGYKYTIERPDNLNVDLGVTNPAGSIAFGLISMSDFMLDLELSALQADG
YGEVISTPKVMTADKQPAKVATGQQVPYQTTTNSAAGATASTSFKDALLSLDVTPSITPDGKIQMKLDISKDSVAGAAPN
GELILNKNQINTNVLVNNGETVILGGVFEQTTSNSQTKVPFFGDIPVVGRLFRKDVKSDDKQELLIFVTPRIVNDTLVRN
H

Nucleotide

• Length: 2166 bp

>NTDB_id=444674 HLV59_RS01535 WP_171429190.1 323034..325199(+) (pilQ) [Acinetobacter lactucae isolate QL-1]
ATGAATCACGTATTCAGTCAGTTTTCTATGGGGGCTGTAGCGATTGCAATTATGCAGGTTGCATCTGCACAGGTCAGCAT
GACCAATATTGTACCGACGCAAATAGCTGGTCAGGGTACGGAAATTCGAGTGATGTTTAATGGTTTGCCGCCGCAACCAC
AAGCATATCAACTTGAAAATCCTTCACGTTTAATTTTAGATTTTAATAAAGCGCAGCAGAATCTCACACAGACAAAAGTA
GCGATTGGAACGAATGAGGCGAGCTCGGTCGATGTGAGCTCTGATGATCAGCGTTCACGTTTGACTGTCAATTTAAAAGA
AGCAGGTGCTTTTACTACTCGTATTGAAGGCAATACTTTTATTTTAAAAATTAATACAGCTCAAGCTATAGTGAAGCCCG
CACAAACAAGTGTGATGCAACTCCAAGGTGTTTTAAATATTGGCTTTCAGCGCGGTGGTCAAGGAGAAGGCCTTATTGTT
ATCGATTTGCTAGGTAGCAATACCCCTGTTGATGTGCAGCAACAAGGTAGCAAAGTTGTAGTAAAAACACTAGGCTCTAA
AATTCCCGCGCATTTAGCTAAACGTTTAAATGTAAATGATTTTGCGACGCCTGTTTCGACAATTGAATCTTATAATGAAA
AAGGCAATGGTGTTATTACAATCCAATCCACTGGTAGCTATGAATATATGGCTTATCAGGCGGAAAATAAATTGACCATT
AGCTTAAAGCGTCCGCAGGACAAAAATGTAACCTCTTTATATAAGACACCTAATTACTCTGGGAATAAGCTTTCTCTTGA
TTTCCAAGATATTGAAGTCCGTCGCGTTTTACAATTATTGGCAGATTTTACTGGCATTAATATGGTTGCGGCTGACAGCG
TTCAAGGTAATATTACTTTGCGTTTAAAAGATGTTCCGTGGGACCAAGCACTTGATATTATTTTAAAAACTAAAAATTTA
GATAAACGCAGAAATGGAAATGTAATTTGGATTGCTCCAGTTACAGAATTGATTAAGGCCGAAGAAGAAGAGGCGAAAGC
TGTTGCACAGAGTGTGAAATTAGCGCCATTGCAAACTGAGTATATTCAACTGAAATATGCACGAGCTCAAGATATTATGA
GCTTAGTTACCAAAGGCTCAAACAATAGTAATGGTTTGCAGAGTACGTCTGGCGGGGGTACTTCAACCTCAACCAATTTA
AATACGGGTGTTGATAGTTTAGGGAATAATGTAGGAAGTTTATTGAGTCCACGTGGAACAATTACTCAAGATGATCGTAC
CAATACCTTAATTATTAATGATACGGCTCAGTCGATTGATCAAATTCGTAAAATGATAGATTTGCTGGATGTACAAGTTA
AACAAGTTATGGTTGAGGCACGTATCGTAAGAGCCTCTACTTCTTTTACGAAAGAGCTTGGTGTTAAATGGGGCATATTA
TCGCAAGGGATTACTAACAATAATAATTTGTTAGTTGGTGGTAGTGAAACGACCTTGTGGAATCTAAGAGAACCTAAAAA
AGATGAAACCACAGGGGGTTATAAATATACGATTGAACGCCCAGATAATTTAAATGTTGATTTAGGGGTAACTAATCCAG
CTGGAAGTATTGCCTTTGGCTTGATTAGTATGTCGGATTTTATGCTTGATCTCGAACTTTCTGCCCTACAAGCTGATGGC
TATGGTGAGGTGATTTCCACACCTAAAGTGATGACTGCAGATAAGCAACCTGCAAAAGTTGCAACAGGCCAACAGGTCCC
ATATCAAACCACGACGAATTCTGCTGCTGGCGCTACAGCAAGTACATCATTTAAAGATGCGCTTTTAAGTTTGGATGTTA
CCCCGAGCATTACGCCTGATGGCAAAATTCAAATGAAATTGGATATTTCAAAGGATTCTGTTGCTGGCGCGGCTCCTAAT
GGTGAGTTAATTTTAAATAAGAATCAGATTAATACCAATGTACTCGTCAATAATGGTGAAACTGTTATTTTAGGAGGAGT
ATTTGAGCAGACGACTTCTAACTCACAAACCAAGGTTCCTTTCTTTGGAGACATTCCTGTAGTTGGACGTTTATTTAGAA
AAGATGTGAAATCTGATGATAAGCAAGAGTTACTGATTTTCGTTACGCCACGAATTGTTAATGACACTTTGGTGAGAAAT
CATTAA

Domains

Predicted by InterproScan.

• AMIN domain (AMIN) (39-118)

• Secretin and TonB N terminus short domain (STN) (291-333)

• Bacterial type II and III secretion system protein (Secretin) (555-713)

• Bacterial type II/III secretion system short domain (Secretin_N) (360-455)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	91.956	100	0.92
pilQ	Acinetobacter baumannii strain A118	91.817	100	0.918
comQ	Acinetobacter baylyi ADP1	73.997	100	0.742
pilQ	Pseudomonas aeruginosa PAK	38.985	100	0.405