Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   IUJ46_RS02990 Genome accession   NZ_CP064364
Coordinates   572935..573117 (+) Length   60 a.a.
NCBI ID   WP_029714017.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain PartK-Spyogenes-RM8376     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 567935..578117
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IUJ46_RS02945 (IUJ46_02920) - 568328..568966 (+) 639 WP_046735270.1 hypothetical protein -
  IUJ46_RS02950 (IUJ46_02925) - 568978..569250 (+) 273 WP_011017397.1 hypothetical protein -
  IUJ46_RS02955 (IUJ46_02930) - 569247..569474 (+) 228 WP_029714020.1 phage holin -
  IUJ46_RS02960 (IUJ46_02935) - 569597..570802 (+) 1206 WP_029714018.1 glucosaminidase domain-containing protein -
  IUJ46_RS02965 (IUJ46_02940) - 570918..571274 (-) 357 WP_011054446.1 hypothetical protein -
  IUJ46_RS02970 (IUJ46_02945) - 571332..571571 (-) 240 WP_011054447.1 hypothetical protein -
  IUJ46_RS02975 (IUJ46_02950) - 571835..572086 (-) 252 WP_011054448.1 hypothetical protein -
  IUJ46_RS02980 (IUJ46_02955) - 572227..572373 (-) 147 WP_011054449.1 hypothetical protein -
  IUJ46_RS02985 (IUJ46_02960) - 572527..572736 (+) 210 WP_011054450.1 helix-turn-helix transcriptional regulator -
  IUJ46_RS02990 (IUJ46_02965) prx 572935..573117 (+) 183 WP_029714017.1 hypothetical protein Regulator
  IUJ46_RS02995 (IUJ46_02970) - 573340..573747 (+) 408 Protein_596 nucleoside-diphosphate kinase -
  IUJ46_RS03000 (IUJ46_02975) lepA 573871..575703 (+) 1833 WP_010922253.1 translation elongation factor 4 -
  IUJ46_RS03005 (IUJ46_02980) slc2 575961..576779 (+) 819 WP_029714016.1 LPXTG-anchored collagen-like adhesin Scl2/SclB -
  IUJ46_RS03010 (IUJ46_02985) msrB 576965..577402 (+) 438 WP_010922255.1 peptide-methionine (R)-S-oxide reductase MsrB -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6890.90 Da        Isoelectric Point: 4.1947

>NTDB_id=442983 IUJ46_RS02990 WP_029714017.1 572935..573117(+) (prx) [Streptococcus pyogenes strain PartK-Spyogenes-RM8376]
MLTYDEFKQAIDNGYITADTVAIVRKNGLIFDYVLPHESVRSCEIVIEERVAEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=442983 IUJ46_RS02990 WP_029714017.1 572935..573117(+) (prx) [Streptococcus pyogenes strain PartK-Spyogenes-RM8376]
ATGCTAACATACGACGAGTTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACACAGTAGCGATCGTGCGTAAAAA
CGGATTGATATTTGATTATGTGTTGCCGCACGAGTCTGTGAGATCGTGTGAGATTGTGATCGAGGAGAGGGTGGCGGAGG
TGATGGTGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1

  prx Streptococcus pyogenes MGAS315

80

100

0.8

  prx Streptococcus pyogenes MGAS315

75

100

0.75

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS8232

73.333

100

0.733

  prx Streptococcus pyogenes MGAS315

80.952

70

0.567

  prx Streptococcus pyogenes MGAS315

78.571

70

0.55