Detailed information NTG0438678

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: HC658_RS17475
• Genome accession: NZ_CP051466
• Coordinates: 3388214..3388807 (+)
• Length: 197 a.a.
• NCBI ID: WP_003228214.1
• Uniprot ID: A0A199WEF2
• Organism: Bacillus subtilis subsp. subtilis strain UCMB5021
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3383214..3393807

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HC658_RS17445 (HC658_34350)	psmA	3383470..3383805 (+)	336	WP_003242480.1	SMR family transporter	-
HC658_RS17450 (HC658_34360)	psmB	3383805..3384125 (+)	321	WP_003228222.1	QacE family quaternary ammonium compound efflux SMR transporter	-
HC658_RS17455 (HC658_34370)	yvdQ	3384161..3384673 (-)	513	WP_014478056.1	DUF3231 family protein	-
HC658_RS17460 (HC658_34380)	cotNP	3384925..3386268 (-)	1344	WP_003228217.1	FAD-binding oxidoreductase	-
HC658_RS17465 (HC658_34390)	cotR	3386624..3387586 (+)	963	WP_029725962.1	sporulation hydrolase CotR	-
HC658_RS17475 (HC658_34410)	clpP	3388214..3388807 (+)	594	WP_003228214.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
HC658_RS17480 (HC658_34420)	pgmB	3388851..3389525 (-)	675	WP_032722567.1	beta-phosphoglucomutase	-
HC658_RS17485 (HC658_34430)	malL	3389522..3391207 (-)	1686	WP_032722569.1	oligo-1,6-glucosidase	-
HC658_RS17490 (HC658_34440)	mdxK	3391200..3393473 (-)	2274	WP_032722571.1	maltose phosphorylase	-

Sequence

Protein

• Length: 197 a.a.
• Molecular weight: 21682.00 Da
• Isoelectric Point: 4.9416

>NTDB_id=438678 HC658_RS17475 WP_003228214.1 3388214..3388807(+) (clpP) [Bacillus subtilis subsp. subtilis strain UCMB5021]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK

Nucleotide

• Length: 594 bp

>NTDB_id=438678 HC658_RS17475 WP_003228214.1 3388214..3388807(+) (clpP) [Bacillus subtilis subsp. subtilis strain UCMB5021]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCACTTGGCGGTGCGCAAGGTCAAGCGA
CAGAAATTGAAATTGCTGCGAAACGCATTCTCTTGCTTCGTGACAAATTAAACAAAGTCCTAGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGACAAAAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

3D structure

• AlphaFold DB: A0A199WEF2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	100	100	1
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.617	95.431	0.655
clpP	Streptococcus thermophilus LMG 18311	58.163	99.492	0.579
clpP	Streptococcus thermophilus LMD-9	58.163	99.492	0.579
clpP	Streptococcus pneumoniae D39	57.812	97.462	0.563
clpP	Streptococcus pneumoniae Rx1	57.812	97.462	0.563
clpP	Streptococcus pneumoniae R6	57.812	97.462	0.563
clpP	Streptococcus pneumoniae TIGR4	57.812	97.462	0.563
clpP	Lactococcus lactis subsp. cremoris KW2	57.895	96.447	0.558
clpP	Streptococcus pyogenes JRS4	56.122	99.492	0.558
clpP	Streptococcus pyogenes MGAS315	56.122	99.492	0.558
clpP	Streptococcus mutans UA159	54.822	100	0.548
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.789	96.447	0.538