Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   HFV09_RS08145 Genome accession   NZ_CP051138
Coordinates   1610784..1611335 (-) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 4063-05     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1605784..1616335
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HFV09_RS08110 rsfS 1606365..1606718 (-) 354 WP_003049699.1 ribosome silencing factor -
  HFV09_RS08115 - 1606720..1606980 (-) 261 WP_011528257.1 isochorismatase family protein -
  HFV09_RS08120 yqeK 1606956..1607549 (-) 594 WP_003055753.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  HFV09_RS08125 - 1607546..1608178 (-) 633 WP_002991091.1 nicotinate-nucleotide adenylyltransferase -
  HFV09_RS08130 yhbY 1608247..1608555 (-) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  HFV09_RS08135 yqeH 1608580..1609698 (-) 1119 WP_011528256.1 ribosome biogenesis GTPase YqeH -
  HFV09_RS08140 - 1609698..1610225 (-) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  HFV09_RS08145 comX/sigX/comX2/sigX2 1610784..1611335 (-) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=436183 HFV09_RS08145 WP_010921894.1 1610784..1611335(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain 4063-05]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=436183 HFV09_RS08145 WP_010921894.1 1610784..1611335(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain 4063-05]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.