Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | BCF_RS13400 | Genome accession | NC_016779 |
| Coordinates | 2569208..2569789 (-) | Length | 193 a.a. |
| NCBI ID | WP_000991624.1 | Uniprot ID | - |
| Organism | Bacillus cereus F837/76 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2564208..2574789
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCF_RS13370 (bcf_13625) | - | 2564222..2565058 (-) | 837 | WP_000557585.1 | PP2C family serine/threonine-protein phosphatase | - |
| BCF_RS13375 (bcf_13630) | - | 2565042..2565533 (-) | 492 | WP_002002908.1 | HIT family protein | - |
| BCF_RS13380 (bcf_13635) | - | 2565634..2565801 (-) | 168 | WP_002053336.1 | hypothetical protein | - |
| BCF_RS13385 (bcf_13640) | - | 2566099..2566935 (-) | 837 | WP_001059838.1 | proline/glycine betaine ABC transporter permease | - |
| BCF_RS13390 (bcf_13645) | - | 2566928..2568133 (-) | 1206 | WP_000370610.1 | glycine betaine/L-proline ABC transporter ATP-binding protein | - |
| BCF_RS13395 (bcf_13650) | - | 2568305..2569162 (+) | 858 | WP_001227638.1 | glycine betaine ABC transporter substrate-binding protein | - |
| BCF_RS13400 (bcf_13655) | clpP | 2569208..2569789 (-) | 582 | WP_000991624.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| BCF_RS13405 (bcf_13660) | - | 2569811..2570497 (-) | 687 | WP_000337500.1 | RNA polymerase subunit sigma-70 | - |
| BCF_RS13410 (bcf_13665) | - | 2570641..2570961 (+) | 321 | WP_001125378.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| BCF_RS13415 (bcf_13670) | rpiA | 2570966..2571628 (+) | 663 | WP_000364536.1 | ribose 5-phosphate isomerase A | - |
| BCF_RS13420 (bcf_13675) | - | 2571736..2572170 (+) | 435 | WP_000555725.1 | GNAT family N-acetyltransferase | - |
| BCF_RS13425 (bcf_13680) | - | 2572301..2573668 (-) | 1368 | WP_001065242.1 | lytic polysaccharide monooxygenase | - |
| BCF_RS13430 (bcf_13685) | - | 2574106..2574624 (-) | 519 | WP_000720567.1 | DNA topology modulation protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21250.48 Da Isoelectric Point: 4.9174
>NTDB_id=43334 BCF_RS13400 WP_000991624.1 2569208..2569789(-) (clpP) [Bacillus cereus F837/76]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTEQ
PIERVAHDTERDYFMTAEEAKAYGIVDDVVTKK
MNAIPYVVEQTKLGERSYDIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTEQ
PIERVAHDTERDYFMTAEEAKAYGIVDDVVTKK
Nucleotide
Download Length: 582 bp
>NTDB_id=43334 BCF_RS13400 WP_000991624.1 2569208..2569789(-) (clpP) [Bacillus cereus F837/76]
ATGAATGCAATTCCATATGTTGTAGAACAAACGAAATTAGGAGAGCGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGTATTGTTATTATCGGTTCAGAAATAAATGATCAAGTAGCGAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCAG
AAGATGCAGAGAAAGATATATTTTTATACATTAATAGCCCAGGCGGATCAACGACAGCAGGTTTTGCCATATTAGATACG
ATGAATTTAATTAAACCAGACGTGCAGACACTATGCATGGGATTTGCAGCATCATTTGGTGCATTGTTATTATTATCAGG
TGCAAAAGGAAAACGATTTGCACTCCCAAATAGTGAAATTATGATTCATCAGCCACTTGGTGGTGCGCAAGGGCAAGCGA
CGGAAATCGAAATTACAGCAAAAAGAATTTTAAAGTTAAAACATGATATTAATAAAATGATTGCAGAAAAAACAGAGCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TGATGTTGTTACGAAAAAATAG
ATGAATGCAATTCCATATGTTGTAGAACAAACGAAATTAGGAGAGCGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGTATTGTTATTATCGGTTCAGAAATAAATGATCAAGTAGCGAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCAG
AAGATGCAGAGAAAGATATATTTTTATACATTAATAGCCCAGGCGGATCAACGACAGCAGGTTTTGCCATATTAGATACG
ATGAATTTAATTAAACCAGACGTGCAGACACTATGCATGGGATTTGCAGCATCATTTGGTGCATTGTTATTATTATCAGG
TGCAAAAGGAAAACGATTTGCACTCCCAAATAGTGAAATTATGATTCATCAGCCACTTGGTGGTGCGCAAGGGCAAGCGA
CGGAAATCGAAATTACAGCAAAAAGAATTTTAAAGTTAAAACATGATATTAATAAAATGATTGCAGAAAAAACAGAGCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TGATGTTGTTACGAAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
67.539 |
98.964 |
0.668 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
66.667 |
97.927 |
0.653 |
| clpP | Streptococcus thermophilus LMD-9 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pneumoniae Rx1 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus thermophilus LMG 18311 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pneumoniae D39 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pneumoniae R6 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pneumoniae TIGR4 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus pyogenes MGAS315 |
55.026 |
97.927 |
0.539 |
| clpP | Streptococcus pyogenes JRS4 |
55.026 |
97.927 |
0.539 |
| clpP | Streptococcus mutans UA159 |
52.91 |
97.927 |
0.518 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
51.852 |
97.927 |
0.508 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.735 |
97.927 |
0.487 |