Detailed information NTG0043282

Bioinformatically predicted

Overview

• Name: pptB
• Type: Regulator
• Locus tag: SCIM_RS01720
• Genome accession: NC_018073
• Coordinates: 342794..343840 (+)
• Length: 348 a.a.
• NCBI ID: WP_003078361.1
• Uniprot ID: -
• Organism: Streptococcus intermedius JTH08
• Function: export ComS (predicted from homology) Competence regulation

Genomic Context

Location: 337794..348840

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCIM_RS01690 (SCIM_0293)	tsaE	339182..339622 (+)	441	WP_003078375.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-
SCIM_RS01695 (SCIM_0294)	-	339615..340136 (+)	522	WP_003073848.1	GNAT family N-acetyltransferase	-
SCIM_RS01700 (SCIM_0295)	brpA	340144..341247 (+)	1104	WP_003078359.1	biofilm formation/cell division transcriptional regulator BrpA	-
SCIM_RS01705 (SCIM_0296)	-	341290..341577 (-)	288	WP_003078430.1	hypothetical protein	-
SCIM_RS01710 (SCIM_0297)	-	341587..341997 (-)	411	WP_003073842.1	HIT family protein	-
SCIM_RS01715 (SCIM_0298)	pptA	342066..342797 (+)	732	WP_003073841.1	ABC transporter ATP-binding protein	Regulator
SCIM_RS01720 (SCIM_0299)	pptB	342794..343840 (+)	1047	WP_003078361.1	ABC transporter permease	Regulator
SCIM_RS01725	ccrZ	343891..344688 (+)	798	WP_003073837.1	cell cycle regulator CcrZ	-
SCIM_RS01730 (SCIM_0300)	trmB	344685..345320 (+)	636	WP_003078354.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	-
SCIM_RS01735 (SCIM_0301)	-	345721..346413 (+)	693	WP_003073834.1	VIT family protein	-
SCIM_RS01740 (SCIM_0302)	rimP	346625..347113 (+)	489	WP_003078411.1	ribosome maturation factor RimP	-
SCIM_RS01745 (SCIM_0303)	nusA	347165..348358 (+)	1194	WP_003078357.1	transcription termination factor NusA	-
SCIM_RS01750 (SCIM_0304)	rnpM	348369..348665 (+)	297	WP_003078278.1	RNase P modulator RnpM	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 40787.15 Da
• Isoelectric Point: 10.4104

>NTDB_id=43282 SCIM_RS01720 WP_003078361.1 342794..343840(+) (pptB) [Streptococcus intermedius JTH08]
MKEVFQKRKQVFRNQCLKYSRYVFNDHFVLFLLVFSGFLAVQYSQLLRNFPKNHLPIILALAVLLVFLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQKQMCSSYLLWSVFQTAILLLAAPLLLALGLPFWGWFILVFFMLIAKWFLFLKKSRRFYQGAG
INWGYLIDYEERRKQTILRFFALFTNVKGISNSVKRRAYLDGLTNILPKRQSTTWQNMFLRSYLRNGDFLALTMRLLFLS
LLGIGLLGQSWIAAVFVILLNYLLLFQLTALYNAFDYQYLTFLFPLEIGLKLKGVRQVIVLVGYSVLLVETIMALLFFQD
RVALLFMVGVTLLLYFFYLPVKLKSLVD

Nucleotide

• Length: 1047 bp

>NTDB_id=43282 SCIM_RS01720 WP_003078361.1 342794..343840(+) (pptB) [Streptococcus intermedius JTH08]
ATGAAAGAAGTGTTTCAAAAGCGCAAGCAAGTATTTCGCAATCAATGTTTGAAATATTCACGCTATGTTTTTAACGATCA
TTTTGTTCTATTTTTATTAGTTTTTAGTGGTTTTTTAGCTGTTCAATATAGTCAACTGTTGCGAAATTTTCCTAAAAATC
ACCTGCCAATTATTCTTGCTTTAGCAGTTCTTTTGGTGTTCTTGTTGCCTTTGGGAAGAATTGCAACGTATATGGAAAAG
CCAGATAGTCTATTTTTGTTGGTCAAAGAAGAAGAATTAAAAAGTTATTTACAAAAACAAATGTGTTCATCTTATCTATT
ATGGAGTGTATTTCAAACGGCTATTCTATTACTAGCAGCGCCACTCCTTTTGGCGCTAGGATTACCATTTTGGGGATGGT
TTATTCTTGTATTTTTTATGTTAATAGCAAAATGGTTTCTATTTTTGAAAAAGAGCCGAAGATTTTATCAAGGAGCAGGC
ATAAATTGGGGCTATCTCATTGACTACGAAGAGAGACGAAAGCAGACAATCTTGCGTTTCTTTGCTCTATTTACCAATGT
AAAAGGAATCTCCAATAGCGTGAAACGCCGAGCCTATCTTGATGGTTTGACAAATATTTTGCCAAAAAGGCAATCAACCA
CTTGGCAGAATATGTTTTTACGCTCTTATTTGCGAAATGGTGATTTTCTGGCTTTGACCATGCGGTTGCTATTTCTATCT
CTTTTAGGAATTGGCTTGCTCGGTCAATCTTGGATTGCGGCTGTTTTTGTGATACTGTTGAATTATCTTTTGCTATTTCA
ATTGACTGCTTTGTACAACGCTTTTGATTATCAATATTTGACATTCTTATTTCCTCTAGAAATCGGATTAAAGTTAAAGG
GTGTGAGACAAGTGATTGTTCTTGTTGGTTACAGTGTGCTGTTAGTTGAAACAATTATGGCGTTGCTATTTTTCCAAGAT
AGAGTTGCACTGCTTTTCATGGTAGGAGTTACACTATTGCTTTATTTTTTCTATTTACCAGTTAAATTAAAAAGTTTGGT
TGACTAA

Domains

Predicted by InterProScan.

• Bacterial ABC transporter protein EcsB (EcsB) (2-157)

• Bacterial ABC transporter protein EcsB (EcsB) (156-329)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pptB	Streptococcus thermophilus LMD-9	47.414	100	0.474
pptB	Streptococcus salivarius strain HSISS4	46.552	100	0.466