Detailed information NTG0427690

Bioinformatically predicted

Overview

• Name: pilB
• Type: Machinery gene
• Locus tag: G7038_RS11395
• Genome accession: NZ_CP049756
• Coordinates: 2354552..2355940 (-)
• Length: 462 a.a.
• NCBI ID: WP_150332209.1
• Uniprot ID: -
• Organism: Pasteurella multocida strain KVNON-213
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2349552..2360940

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G7038_RS11365	-	2349679..2351052 (-)	1374	WP_096743226.1	sodium:alanine symporter family protein	-
G7038_RS11370	-	2351522..2351770 (-)	249	WP_115299813.1	GNAT family N-acetyltransferase	-
G7038_RS11375	yacG	2351770..2351973 (-)	204	WP_005719879.1	DNA gyrase inhibitor YacG	-
G7038_RS11380	coaE	2351984..2352604 (-)	621	WP_115299814.1	dephospho-CoA kinase	-
G7038_RS11385	-	2352616..2353341 (-)	726	WP_115299815.1	A24 family peptidase	-
G7038_RS11390	pilC	2353341..2354552 (-)	1212	WP_115299816.1	type II secretion system F family protein	Machinery gene
G7038_RS11395	pilB	2354552..2355940 (-)	1389	WP_150332209.1	GspE/PulE family protein	Machinery gene
G7038_RS11400	pilA	2355940..2356374 (-)	435	WP_150332210.1	prepilin peptidase-dependent pilin	Machinery gene
G7038_RS11405	ampD	2356534..2357100 (+)	567	WP_005719130.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
G7038_RS11410	rppH	2357686..2358282 (+)	597	WP_083004799.1	RNA pyrophosphohydrolase	-
G7038_RS11415	-	2358285..2359079 (+)	795	WP_083004796.1	sulfite exporter TauE/SafE family protein	-
G7038_RS11420	lgt	2359089..2359892 (+)	804	WP_005751073.1	prolipoprotein diacylglyceryl transferase	-
G7038_RS11425	-	2359898..2360749 (+)	852	WP_115097855.1	thymidylate synthase	-

Sequence

Protein

• Length: 462 a.a.
• Molecular weight: 52213.84 Da
• Isoelectric Point: 6.3686

>NTDB_id=427690 G7038_RS11395 WP_150332209.1 2354552..2355940(-) (pilB) [Pasteurella multocida strain KVNON-213]
MFHENPLCTVSAMTGEVFEIQQALWQKNQQQQRFLLRYFALPLQEDEKQLWLGVDSLANLSACDAFSFLTNKHIEPVLLS
TNELKRALQQLSPPKLQVEENIPTVYQVAQLDSDSATDEPLIQLLDQVFERALQLQASDIHFEPQQHSLQVRFRIDGVLQ
VQPSFSGILANRLISRLKLLAKLDISETRLPQDGCFQFKTTFSDTLDFRLSTLPTHLGEKAVLRLQRNKPIHFSFAELGM
TADQQHRFQHALSQPQGLILVTGPTGSGKSISLYSALAWLNSIEKHILTAEDPIEIALTGIIQTQVNTQIGLDFKRLLRT
FLRQDPDIIMLGEIRDEESALIALRAAQTGHLVLSTLHTNDAPSALTRLQQLGVPLHEIEQSLLLVVAQRLLRRRCCDCS
VETQSACRCYQGYKGRIGVYQFLQKDKTGCFVTDFSSLRESAKEKVRLGMTDDNEVQRVLGE

Nucleotide

• Length: 1389 bp

>NTDB_id=427690 G7038_RS11395 WP_150332209.1 2354552..2355940(-) (pilB) [Pasteurella multocida strain KVNON-213]
ATGTTTCATGAGAATCCTTTGTGTACTGTTAGCGCAATGACAGGAGAGGTATTTGAAATCCAGCAGGCGCTATGGCAAAA
AAATCAGCAACAACAACGCTTTTTATTACGTTATTTTGCCTTGCCTTTACAAGAAGATGAAAAACAGCTGTGGCTTGGCG
TGGATTCGTTAGCGAATTTATCAGCATGTGATGCCTTTTCTTTTTTAACGAATAAACACATTGAGCCTGTTTTATTATCA
ACAAATGAACTGAAACGGGCATTGCAGCAACTTTCCCCACCAAAATTACAAGTGGAAGAAAACATACCCACGGTTTATCA
AGTCGCGCAATTAGATTCTGATTCCGCGACGGATGAACCTTTGATTCAATTACTTGATCAGGTTTTTGAACGTGCATTAC
AGCTACAGGCTTCTGACATTCATTTTGAACCGCAACAGCATAGCTTACAAGTGCGTTTTAGAATCGATGGTGTATTACAA
GTCCAGCCTTCCTTTTCAGGAATATTGGCTAATCGCCTGATTTCTCGTCTTAAATTATTAGCAAAATTAGATATTAGTGA
AACACGCTTGCCTCAGGACGGTTGTTTCCAATTTAAAACGACATTTTCTGATACATTAGATTTTCGACTTTCTACGTTGC
CGACACATTTAGGCGAAAAAGCGGTATTGCGTTTACAGCGAAATAAGCCTATTCATTTCAGTTTTGCTGAGTTGGGGATG
ACTGCAGACCAACAACACAGGTTCCAACACGCGTTAAGTCAGCCTCAAGGACTGATTTTAGTCACGGGACCAACAGGGAG
TGGAAAAAGCATTTCGCTTTATAGTGCGCTAGCTTGGCTCAACAGCATAGAAAAGCATATTTTAACAGCAGAAGATCCGA
TTGAAATTGCGTTGACTGGGATAATCCAAACGCAAGTCAATACGCAAATAGGACTGGATTTCAAGCGCTTATTACGCACT
TTTTTACGTCAAGATCCAGACATTATTATGTTAGGGGAAATTCGTGATGAGGAAAGTGCGTTAATCGCATTACGTGCAGC
TCAAACTGGGCATTTAGTCCTCTCTACCTTGCATACGAATGATGCCCCCTCTGCCCTTACTCGCTTACAGCAATTAGGGG
TGCCTTTGCATGAAATTGAACAAAGCCTATTACTTGTTGTGGCGCAGCGTTTATTGCGTCGTCGTTGTTGTGATTGCAGT
GTAGAGACACAATCGGCGTGTCGTTGCTATCAAGGGTATAAAGGGAGGATTGGGGTATATCAATTTTTACAAAAAGATAA
AACAGGGTGTTTTGTCACGGATTTTAGTAGTTTACGCGAGAGTGCGAAGGAAAAAGTTCGTTTAGGCATGACCGATGACA
ATGAAGTACAACGTGTATTAGGTGAATGA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein E, N-terminal domain (MshEN) (19-93)

• Type II/IV secretion system protein (T2SSE) (128-394)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilB	Haemophilus influenzae 86-028NP	67.991	98.052	0.667
pilB	Haemophilus influenzae Rd KW20	67.329	98.052	0.66
pilB	Glaesserella parasuis strain SC1401	58.811	98.268	0.578
pilB	Acinetobacter baumannii D1279779	39.351	100	0.42
pilB	Vibrio parahaemolyticus RIMD 2210633	39.501	100	0.411
pilB	Vibrio campbellii strain DS40M4	39.004	100	0.407
pilB	Acinetobacter baylyi ADP1	37.675	100	0.407
pilB	Vibrio cholerae strain A1552	38.066	100	0.4
pilB	Legionella pneumophila strain ERS1305867	37.014	100	0.392