Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   G8B40_RS06205 Genome accession   NZ_CP049692
Coordinates   1222960..1223142 (-) Length   60 a.a.
NCBI ID   WP_011528776.1    Uniprot ID   A0A660A5W9
Organism   Streptococcus pyogenes strain ABC157     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 1222960..1258625 1222960..1223142 within 0


Gene organization within MGE regions


Location: 1222960..1258625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8B40_RS06205 (G8B40_06245) prx 1222960..1223142 (-) 183 WP_011528776.1 hypothetical protein Regulator
  G8B40_RS06210 (G8B40_06250) entC3 1223255..1224037 (-) 783 WP_002988472.1 enterotoxin type C3 EntC3 -
  G8B40_RS06215 (G8B40_06255) - 1224285..1225409 (-) 1125 WP_002988467.1 Fic family protein -
  G8B40_RS06220 (G8B40_06260) - 1225545..1226762 (-) 1218 WP_011528778.1 peptidoglycan amidohydrolase family protein -
  G8B40_RS06225 (G8B40_06265) - 1226881..1227108 (-) 228 WP_003058873.1 phage holin -
  G8B40_RS06230 (G8B40_06270) - 1227105..1227377 (-) 273 WP_011017397.1 hypothetical protein -
  G8B40_RS06235 (G8B40_06275) - 1227389..1228021 (-) 633 WP_011528779.1 hypothetical protein -
  G8B40_RS06240 (G8B40_06280) - 1228024..1228452 (-) 429 WP_011528780.1 DUF1617 family protein -
  G8B40_RS06245 (G8B40_06285) - 1228461..1230242 (-) 1782 WP_011528781.1 gp58-like family protein -
  G8B40_RS06250 (G8B40_06290) hylP 1230257..1231372 (-) 1116 WP_011528782.1 hyaluronoglucosaminidase -
  G8B40_RS06255 (G8B40_06295) - 1231369..1233345 (-) 1977 WP_011528783.1 phage tail spike protein -
  G8B40_RS06260 (G8B40_06300) - 1233327..1234022 (-) 696 WP_002992579.1 hypothetical protein -
  G8B40_RS06265 (G8B40_06305) - 1234019..1236376 (-) 2358 WP_011528784.1 hypothetical protein -
  G8B40_RS06270 (G8B40_06310) - 1236376..1236747 (-) 372 WP_011528785.1 DUF5361 domain-containing protein -
  G8B40_RS06275 (G8B40_06315) - 1236762..1237025 (-) 264 WP_003047548.1 hypothetical protein -
  G8B40_RS06280 (G8B40_06320) - 1237036..1237614 (-) 579 WP_014635577.1 hypothetical protein -
  G8B40_RS06285 (G8B40_06325) - 1237626..1237961 (-) 336 WP_011528787.1 hypothetical protein -
  G8B40_RS06290 (G8B40_06330) - 1237962..1238198 (-) 237 WP_000032787.1 hypothetical protein -
  G8B40_RS06295 (G8B40_06335) - 1238191..1238529 (-) 339 WP_011054681.1 hypothetical protein -
  G8B40_RS06300 (G8B40_06340) - 1238489..1238911 (-) 423 WP_011054682.1 phage Gp19/Gp15/Gp42 family protein -
  G8B40_RS06305 (G8B40_06345) - 1238921..1239121 (-) 201 WP_010922460.1 hypothetical protein -
  G8B40_RS06310 (G8B40_06350) - 1239121..1240032 (-) 912 WP_011528788.1 phage major capsid protein -
  G8B40_RS06315 (G8B40_06355) - 1240057..1240518 (-) 462 WP_010922462.1 DUF4355 domain-containing protein -
  G8B40_RS06320 (G8B40_06360) - 1240598..1242013 (-) 1416 WP_021299324.1 phage terminase large subunit-like protein -
  G8B40_RS06325 (G8B40_06365) - 1242095..1242331 (-) 237 Protein_1208 hypothetical protein -
  G8B40_RS06330 (G8B40_06370) - 1242333..1242599 (-) 267 WP_011054745.1 hypothetical protein -
  G8B40_RS06335 (G8B40_06375) - 1242651..1242875 (-) 225 WP_002994100.1 hypothetical protein -
  G8B40_RS06340 (G8B40_06380) - 1242881..1244374 (-) 1494 WP_010922467.1 hypothetical protein -
  G8B40_RS06345 (G8B40_06385) - 1244367..1245635 (-) 1269 WP_010922468.1 phage portal protein -
  G8B40_RS06350 (G8B40_06390) - 1245632..1245988 (-) 357 WP_002994106.1 hypothetical protein -
  G8B40_RS06355 (G8B40_06395) - 1246136..1246480 (-) 345 WP_011054690.1 HNH endonuclease signature motif containing protein -
  G8B40_RS06360 (G8B40_06400) - 1246588..1247007 (-) 420 WP_011528791.1 DUF1492 domain-containing protein -
  G8B40_RS06365 (G8B40_06405) - 1247083..1247334 (-) 252 WP_011054692.1 hypothetical protein -
  G8B40_RS06370 (G8B40_06410) - 1247331..1247486 (-) 156 WP_011054693.1 hypothetical protein -
  G8B40_RS06375 (G8B40_06415) - 1247483..1247800 (-) 318 WP_011054694.1 DUF1372 family protein -
  G8B40_RS06380 (G8B40_06420) - 1247836..1248348 (-) 513 WP_011054695.1 hypothetical protein -
  G8B40_RS06385 (G8B40_06425) - 1248345..1248677 (-) 333 WP_011184741.1 hypothetical protein -
  G8B40_RS06390 (G8B40_06430) - 1248688..1250034 (-) 1347 WP_011054697.1 PcfJ domain-containing protein -
  G8B40_RS06395 (G8B40_06435) - 1250031..1250426 (-) 396 WP_011054698.1 Cas9 inhibitor AcrIIA9 family protein -
  G8B40_RS06400 (G8B40_06440) - 1250791..1251588 (-) 798 WP_011054699.1 PD-(D/E)XK nuclease-like domain-containing protein -
  G8B40_RS06405 (G8B40_06445) - 1251581..1251781 (-) 201 WP_000594115.1 hypothetical protein -
  G8B40_RS06410 (G8B40_06450) - 1251778..1252699 (-) 922 Protein_1225 recombinase RecT -
  G8B40_RS06415 (G8B40_06455) - 1252702..1253031 (-) 330 WP_011528796.1 hypothetical protein -
  G8B40_RS06420 (G8B40_06460) - 1253087..1253293 (-) 207 WP_002988357.1 hypothetical protein -
  G8B40_RS06425 (G8B40_06465) - 1253302..1253442 (-) 141 WP_002988354.1 hypothetical protein -
  G8B40_RS06430 (G8B40_06470) - 1253439..1253673 (-) 235 Protein_1229 hypothetical protein -
  G8B40_RS06435 (G8B40_06475) - 1253654..1254040 (-) 387 WP_011017564.1 DnaD domain-containing protein -
  G8B40_RS09610 - 1254166..1254435 (-) 270 WP_011106700.1 replication protein -
  G8B40_RS06440 (G8B40_06480) - 1254529..1254714 (-) 186 WP_010922477.1 hypothetical protein -
  G8B40_RS06445 (G8B40_06485) - 1254716..1255027 (-) 312 WP_010922478.1 excisionase -
  G8B40_RS06450 (G8B40_06490) - 1255297..1255509 (-) 213 WP_010922479.1 helix-turn-helix domain-containing protein -
  G8B40_RS06455 (G8B40_06495) - 1255710..1256465 (+) 756 WP_010922480.1 XRE family transcriptional regulator -
  G8B40_RS06460 (G8B40_06500) - 1256477..1256995 (+) 519 WP_011528799.1 HIRAN domain-containing protein -
  G8B40_RS06465 (G8B40_06505) - 1257119..1258261 (+) 1143 WP_003051793.1 site-specific integrase -
  G8B40_RS06470 (G8B40_06510) - 1258350..1258625 (-) 276 WP_002983920.1 HU family DNA-binding protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6840.81 Da        Isoelectric Point: 4.7023

>NTDB_id=426986 G8B40_RS06205 WP_011528776.1 1222960..1223142(-) (prx) [Streptococcus pyogenes strain ABC157]
MLTYNEFKQAIDNGYIAGDTVAIVRKDGQIFDYVLPHEKVKNGEVVTKEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=426986 G8B40_RS06205 WP_011528776.1 1222960..1223142(-) (prx) [Streptococcus pyogenes strain ABC157]
ATGCTAACATACAACGAGTTTAAGCAAGCGATTGACAATGGATATATCGCAGGCGATACAGTAGCGATCGTGCGTAAAGA
CGGACAGATTTTTGATTATGTGTTGCCACATGAGAAAGTAAAGAATGGAGAAGTTGTGACTAAGGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A660A5W9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

98.333

100

0.983
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783
  prx Streptococcus pyogenes MGAS315

71.667

100

0.717
  prx Streptococcus pyogenes MGAS315

87.805

68.333

0.6
  prx Streptococcus pyogenes MGAS315

81.395

71.667

0.583
  prx Streptococcus pyogenes MGAS315

76.19

70

0.533