Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   G8B42_RS01440 Genome accession   NZ_CP049690
Coordinates   270674..271225 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain ABC208     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 265674..276225
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8B42_RS01440 (G8B42_01440) comX/sigX/comX2/sigX2 270674..271225 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  G8B42_RS01445 (G8B42_01445) - 271784..272311 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  G8B42_RS01450 (G8B42_01450) yqeH 272311..273429 (+) 1119 WP_011528256.1 ribosome biogenesis GTPase YqeH -
  G8B42_RS01455 (G8B42_01455) yhbY 273454..273762 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  G8B42_RS01460 (G8B42_01460) - 273831..274463 (+) 633 WP_002991091.1 nicotinate-nucleotide adenylyltransferase -
  G8B42_RS01465 (G8B42_01465) yqeK 274460..275053 (+) 594 WP_003055753.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  G8B42_RS01470 (G8B42_01470) - 275029..275289 (+) 261 WP_011528257.1 isochorismatase family protein -
  G8B42_RS01475 (G8B42_01475) rsfS 275291..275644 (+) 354 WP_003049699.1 ribosome silencing factor -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=426855 G8B42_RS01440 WP_010921894.1 270674..271225(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain ABC208]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=426855 G8B42_RS01440 WP_010921894.1 270674..271225(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain ABC208]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.