Detailed information NTG0042346

Bioinformatically predicted

Overview

• Name: cinA
• Type: Machinery gene
• Locus tag: LSA_RS04510
• Genome accession: NC_015978
• Coordinates: 887542..888780 (-)
• Length: 412 a.a.
• NCBI ID: WP_014082170.1
• Uniprot ID: -
• Organism: Fructilactobacillus sanfranciscensis TMW 1.1304
• Function: facilitate localization of RecA (predicted from homology) Homologous recombination

Genomic Context

Location: 882542..893780

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LSA_RS04500 (LSA_09100)	-	884946..885752 (-)	807	WP_014082168.1	TIGR00282 family metallophosphoesterase	-
LSA_RS04505 (LSA_09110)	rny	885838..887397 (-)	1560	WP_041817851.1	ribonuclease Y	-
LSA_RS04510 (LSA_09120)	cinA	887542..888780 (-)	1239	WP_014082170.1	competence/damage-inducible protein A	Machinery gene
LSA_RS04515 (LSA_09130)	pgsA	888800..889387 (-)	588	WP_041817852.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
LSA_RS04520 (LSA_09140)	-	889458..890342 (-)	885	WP_014082172.1	helix-turn-helix transcriptional regulator	-
LSA_RS04525 (LSA_09150)	-	890413..891693 (-)	1281	WP_014082173.1	pitrilysin family protein	-
LSA_RS04530 (LSA_09160)	-	891686..892948 (-)	1263	WP_041817855.1	insulinase family protein	-

Sequence

Protein

• Length: 412 a.a.
• Molecular weight: 45160.47 Da
• Isoelectric Point: 4.5958

>NTDB_id=42346 LSA_RS04510 WP_014082170.1 887542..888780(-) (cinA) [Fructilactobacillus sanfranciscensis TMW 1.1304]
MNAEIITVGTEILLGEIVDTSSPFIARRLANLGIDVYFEDTVGDNYDRLESTISLAESRSDLVVLTGGLGPTEDDITKIS
LAQHLGLDLEIDKKALKKINDFYATYALGKPSNADMMAKYIEGAEILPNEKGFAVGMFLKTDACDYLVLPGPPVEMQYMF
TNFAMPKLARLTSGSSLIDSRVLRFFGIGETELEKDLKELIDNQTNPTLATYAKRNEVTLRITASGETKSEIKELIDNME
KRVLAIIGQYFYGYGDNNSLEEVVVNLLKNKELSITAAESLTSGMFQSRIGNVSGASEVFPGGFVTYSADAKEQLLNIPT
EIIKKYGVVSSETAEYMARNSKDKMKTDIGVSFTGVAGPDSLEGHPAGFFWVGLALPNGQVITKSVNFAKARNEVRDYAT
KTGFKLIYDNLK

Nucleotide

• Length: 1239 bp

>NTDB_id=42346 LSA_RS04510 WP_014082170.1 887542..888780(-) (cinA) [Fructilactobacillus sanfranciscensis TMW 1.1304]
ATGAATGCAGAAATAATTACTGTTGGAACAGAAATTTTACTTGGTGAAATTGTTGATACTAGTTCACCATTTATTGCCAG
AAGATTAGCTAATCTCGGAATTGATGTTTATTTTGAAGACACAGTTGGTGATAATTATGATCGTTTAGAGTCAACTATCA
GTTTGGCCGAAAGTCGGAGTGATTTAGTTGTTTTAACCGGAGGACTTGGTCCAACGGAAGATGACATTACAAAAATATCT
TTGGCACAACATTTAGGACTAGATTTAGAAATTGATAAAAAGGCATTAAAAAAAATTAATGATTTCTATGCAACATATGC
TCTTGGAAAACCAAGCAATGCTGATATGATGGCTAAATACATTGAAGGCGCTGAAATCTTACCAAATGAAAAAGGTTTTG
CTGTCGGAATGTTTTTAAAAACTGATGCATGTGATTATTTGGTATTACCAGGGCCACCAGTAGAAATGCAATATATGTTT
ACTAATTTTGCTATGCCAAAATTAGCTAGATTAACCAGCGGTAGTTCATTAATTGACTCACGCGTACTTCGTTTCTTTGG
AATTGGCGAAACTGAATTAGAAAAGGATTTAAAAGAACTAATTGATAATCAAACTAATCCAACCCTTGCAACTTACGCTA
AACGCAATGAAGTAACTCTTCGAATCACTGCTAGTGGAGAAACTAAGTCTGAGATTAAAGAATTAATTGACAACATGGAA
AAGCGTGTCTTAGCGATTATTGGTCAATATTTCTATGGTTACGGAGATAATAACTCCCTTGAAGAAGTTGTAGTTAATTT
GTTAAAAAACAAAGAATTATCAATTACAGCTGCAGAATCATTAACAAGTGGAATGTTCCAAAGTCGGATTGGAAATGTTT
CAGGAGCGTCTGAGGTATTCCCAGGTGGCTTCGTAACTTATTCTGCCGATGCTAAAGAACAATTATTGAATATTCCAACT
GAGATAATTAAAAAATACGGGGTTGTTTCTTCTGAAACTGCCGAATATATGGCAAGGAATTCCAAAGATAAAATGAAAAC
TGATATTGGGGTTTCATTTACTGGGGTTGCTGGACCAGATAGTTTAGAAGGACATCCTGCTGGATTTTTCTGGGTTGGTT
TAGCGTTACCAAATGGTCAAGTAATTACTAAAAGTGTTAACTTTGCAAAAGCGAGAAATGAAGTTCGTGATTATGCAACT
AAGACAGGATTTAAATTAATATATGACAATTTAAAGTGA

Domains

Predicted by InterproScan.

• Competence-damaged protein (CinA) (258-410)

• Damage-inducible protein CinA KH domain (CinA_KH) (180-253)

• Probable molybdopterin binding domain (MoCF_biosynth) (4-169)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cinA	Streptococcus mitis SK321	47.981	100	0.49
cinA	Streptococcus mitis NCTC 12261	47.981	100	0.49
cinA	Streptococcus pneumoniae Rx1	47.031	100	0.481
cinA	Streptococcus pneumoniae TIGR4	47.031	100	0.481
cinA	Streptococcus pneumoniae R6	47.031	100	0.481
cinA	Streptococcus pneumoniae D39	46.793	100	0.478
cinA	Streptococcus mutans UA159	46.506	100	0.468
cinA	Bacillus subtilis subsp. subtilis str. 168	41.728	98.301	0.41