Detailed information NTG0423227

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: G4D59_RS16025
• Genome accession: NZ_CP048811
• Coordinates: 3094944..3095540 (+)
• Length: 198 a.a.
• NCBI ID: WP_007500118.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain SCU11
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3089944..3100540

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G4D59_RS16005 (G4D59_15920)	nikA	3090275..3091918 (-)	1644	WP_017368099.1	nickel ABC transporter substrate-binding protein	-
G4D59_RS16010 (G4D59_15925)	-	3092208..3093377 (-)	1170	WP_017368100.1	macrolide family glycosyltransferase	-
G4D59_RS16015 (G4D59_15930)	-	3093564..3094115 (-)	552	WP_017359180.1	hypothetical protein	-
G4D59_RS16025 (G4D59_15940)	clpP	3094944..3095540 (+)	597	WP_007500118.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
G4D59_RS16030 (G4D59_15945)	-	3095596..3096174 (-)	579	WP_017368101.1	TIGR00730 family Rossman fold protein	-
G4D59_RS16035 (G4D59_15950)	-	3096311..3096652 (+)	342	WP_017368102.1	MazG nucleotide pyrophosphohydrolase domain-containing protein	-
G4D59_RS16040 (G4D59_15955)	-	3096682..3098304 (-)	1623	WP_017368103.1	SulP family inorganic anion transporter	-
G4D59_RS16045 (G4D59_15960)	-	3098342..3098923 (-)	582	WP_017357909.1	beta-class carbonic anhydrase	-
G4D59_RS16050 (G4D59_15965)	-	3099487..3100464 (+)	978	WP_026050151.1	2-hydroxyacid dehydrogenase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21846.03 Da
• Isoelectric Point: 4.6905

>NTDB_id=423227 G4D59_RS16025 WP_007500118.1 3094944..3095540(+) (clpP) [Bacillus altitudinis strain SCU11]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNTEEQK

Nucleotide

• Length: 597 bp

>NTDB_id=423227 G4D59_RS16025 WP_007500118.1 3094944..3095540(+) (clpP) [Bacillus altitudinis strain SCU11]
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTATCACAGCTTCTCTTCTTAGAAGCCG
AGGATCCAGAAAAAGATATCTCTATCTACATTAACAGCCCTGGCGGTTCGATCACAGCTGGTATGGCCATTTATGATACG
ATGCAATTTATTAAACCAAAGGTATCAACTATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCCCTTCCAAATAGTGAAGTGATGATTCACCAACCACTAGGTGGTGCGCAAGGTCAAGCAA
CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGTGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATACAGAAGAACAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	93.434	100	0.934
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.539	96.465	0.652
clpP	Streptococcus thermophilus LMG 18311	58.549	97.475	0.571
clpP	Streptococcus thermophilus LMD-9	58.549	97.475	0.571
clpP	Lactococcus lactis subsp. cremoris KW2	56.186	97.98	0.551
clpP	Streptococcus pneumoniae Rx1	55.67	97.98	0.545
clpP	Streptococcus pneumoniae D39	55.67	97.98	0.545
clpP	Streptococcus pneumoniae R6	55.67	97.98	0.545
clpP	Streptococcus pneumoniae TIGR4	55.67	97.98	0.545
clpP	Streptococcus pyogenes JRS4	55.44	97.475	0.54
clpP	Streptococcus pyogenes MGAS315	55.44	97.475	0.54
clpP	Streptococcus mutans UA159	54.639	97.98	0.535
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.124	97.98	0.53