Detailed information NTG0422209

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: G0029_RS14260
• Genome accession: NZ_CP048670
• Coordinates: 2930585..2931643 (-)
• Length: 352 a.a.
• NCBI ID: WP_078192532.1
• Uniprot ID: -
• Organism: Acinetobacter sp. YH12138 strain YH12138_T
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2925585..2936643

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G0029_RS14235 (G0029_14220)	aroK	2925898..2926443 (-)	546	WP_078189378.1	shikimate kinase AroK	-
G0029_RS14240 (G0029_14225)	pilQ	2926480..2928594 (-)	2115	WP_180106974.1	type IV pilus secretin PilQ	Machinery gene
G0029_RS14245 (G0029_14230)	pilP	2928656..2929183 (-)	528	WP_078192530.1	pilus assembly protein PilP	Machinery gene
G0029_RS14250 (G0029_14235)	pilO	2929180..2929902 (-)	723	WP_180106821.1	type 4a pilus biogenesis protein PilO	Machinery gene
G0029_RS14255 (G0029_14240)	pilN	2929899..2930585 (-)	687	WP_078189382.1	PilN domain-containing protein	Machinery gene
G0029_RS14260 (G0029_14245)	comM	2930585..2931643 (-)	1059	WP_078192532.1	pilus assembly protein PilM	Machinery gene
G0029_RS14265 (G0029_14250)	ponA	2931809..2934349 (+)	2541	WP_180106819.1	penicillin-binding protein PBP1a	-
G0029_RS14270 (G0029_14255)	-	2934406..2935209 (-)	804	WP_180106972.1	putative RNA methyltransferase	-
G0029_RS14275 (G0029_14260)	mraY	2935287..2936405 (-)	1119	WP_078189386.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38940.56 Da
• Isoelectric Point: 4.4858

>NTDB_id=422209 G0029_RS14260 WP_078192532.1 2930585..2931643(-) (comM) [Acinetobacter sp. YH12138 strain YH12138_T]
MLRLYRKPNKGLIGVDISSTSVKVLELSVKSGRYWVESYALVPLPEGSVVEKNILNPEAVGDCLERAINLANTQTTNAAL
AVPTSMVITKIIEMDADMNDDEREIQIRDDAEQYIPFPLDEASLDFEVLPDRLSNPNRVNVLLVATRIENVEARAEVIQL
AGLTPKIGDVESFAIENAFKVFSDTLPMGVNTVGILDIGHSMTTLSVMQNNKVIYTREQVFGGKQLTQEIQNRYALSFEE
AGRAKKTRALPDDYDIEVLEPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=422209 G0029_RS14260 WP_078192532.1 2930585..2931643(-) (comM) [Acinetobacter sp. YH12138 strain YH12138_T]
GTGCTCAGGTTATATCGTAAGCCAAATAAGGGGTTAATAGGAGTAGATATTAGTTCGACTTCTGTTAAGGTTTTGGAACT
TTCTGTAAAGAGTGGGCGGTATTGGGTAGAAAGCTATGCTTTGGTGCCATTACCAGAAGGAAGTGTTGTTGAAAAGAACA
TATTGAATCCGGAAGCTGTCGGTGACTGTTTAGAGCGCGCAATTAATTTGGCCAATACTCAGACCACTAATGCAGCTTTG
GCGGTTCCAACGTCGATGGTGATTACAAAAATCATCGAAATGGACGCAGATATGAACGATGATGAACGTGAAATTCAGAT
TCGTGATGATGCTGAGCAATATATTCCGTTCCCACTTGATGAAGCGAGCCTTGATTTTGAAGTCTTGCCAGATCGTCTGT
CCAACCCAAATCGTGTCAATGTTTTGCTTGTCGCTACGCGTATTGAAAATGTCGAAGCGCGTGCGGAAGTCATTCAGCTT
GCTGGTCTTACACCAAAAATTGGCGATGTAGAAAGCTTTGCAATTGAAAATGCGTTTAAAGTTTTCTCAGATACTTTGCC
AATGGGTGTGAATACCGTGGGTATTTTAGATATTGGTCATAGTATGACGACCTTATCTGTCATGCAGAATAACAAAGTGA
TTTATACCCGTGAGCAAGTGTTTGGTGGCAAACAATTGACACAGGAAATTCAAAATCGCTATGCATTGTCTTTCGAAGAA
GCAGGTCGAGCGAAAAAAACACGTGCCTTGCCAGATGATTATGATATCGAAGTCTTAGAACCCTTCTTAGAAGCTGTCGT
TCAACAAGCAGCACGTTCTTTACAGTTCTTTTTCTCATCTTCACAGTTCAACGAAATTGACCATATTTTATTGGCAGGGG
GGAATGCCAATATTCCGGGGCTTGCAAAATTACTTCAACAAAAATTGGGTTACCGCGTCACGATTGCCAATCCATTCTTA
CAAATGGGTTTTTCACCTCAAATTGATATTAAAAAAATTGAAAATGATGCCTCATCACTCATGGTGGCATGCGGTCTAGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	84.943	100	0.849
pilM	Acinetobacter baumannii D1279779	84.659	100	0.847
comM	Acinetobacter baylyi ADP1	79.261	100	0.793
pilM	Legionella pneumophila strain ERS1305867	40.678	100	0.409