Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   IB937_RS06145 Genome accession   NZ_CP061132
Coordinates   1232446..1232628 (-) Length   60 a.a.
NCBI ID   WP_002986897.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain BSAC_bs1388 isolate Invasive disease     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1227446..1237628
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IB937_RS06120 (IB937_06120) - 1228595..1229512 (+) 918 WP_010922125.1 neutral zinc metallopeptidase -
  IB937_RS06125 (IB937_06125) - 1229614..1230282 (-) 669 WP_044555076.1 ABC transporter ATP-binding protein -
  IB937_RS06130 (IB937_06130) - 1230292..1231368 (-) 1077 WP_011528465.1 FtsX-like permease family protein -
  IB937_RS06135 (IB937_06135) - 1231441..1231827 (-) 387 WP_011528464.1 YbgA family protein -
  IB937_RS06140 (IB937_06140) - 1231820..1232197 (-) 378 WP_002993028.1 OsmC family protein -
  IB937_RS06145 (IB937_06145) prx 1232446..1232628 (-) 183 WP_002986897.1 hypothetical protein Regulator
  IB937_RS06150 (IB937_06150) - 1232839..1233078 (+) 240 WP_002986898.1 hypothetical protein -
  IB937_RS06155 (IB937_06155) - 1233118..1233591 (+) 474 WP_076634523.1 hypothetical protein -
  IB937_RS06160 (IB937_06160) - 1233593..1233949 (+) 357 WP_003055891.1 hypothetical protein -
  IB937_RS06165 (IB937_06165) acrIIA3 1234082..1234456 (+) 375 WP_023611744.1 anti-CRISPR protein AcrIIA3 -
  IB937_RS06170 (IB937_06170) - 1234456..1235058 (+) 603 WP_023611748.1 AP endonuclease -
  IB937_RS06175 (IB937_06175) - 1235060..1235275 (+) 216 WP_023611751.1 hypothetical protein -
  IB937_RS06180 (IB937_06180) - 1235344..1235583 (+) 240 WP_003055855.1 hypothetical protein -
  IB937_RS06185 (IB937_06185) - 1235769..1236971 (-) 1203 WP_023611747.1 glucosaminidase domain-containing protein -
  IB937_RS06190 (IB937_06190) - 1237087..1237314 (-) 228 WP_000609113.1 phage holin -
  IB937_RS06195 (IB937_06195) - 1237311..1237586 (-) 276 WP_002987582.1 hypothetical protein -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6772.68 Da        Isoelectric Point: 3.9286

>NTDB_id=420364 IB937_RS06145 WP_002986897.1 1232446..1232628(-) (prx) [Streptococcus pyogenes strain BSAC_bs1388 isolate Invasive disease]
MLTYDEFKQAIDDGYIVGDTVAIVRKNGQIFDYVLPGEKVRPSEVVAEEIVEEVVVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=420364 IB937_RS06145 WP_002986897.1 1232446..1232628(-) (prx) [Streptococcus pyogenes strain BSAC_bs1388 isolate Invasive disease]
ATGCTAACATACGACGAGTTTAAGCAAGCAATCGATGACGGATATATCGTAGGAGACACAGTAGCGATTGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCTGGCGAAAAAGTCAGACCGTCGGAGGTTGTGGCTGAGGAAATAGTGGAAGAGG
TGGTGGTGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

98.333

100

0.983

  prx Streptococcus pyogenes MGAS315

81.667

100

0.817

  prx Streptococcus pyogenes MGAS8232

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617

  prx Streptococcus pyogenes MGAS315

82.927

68.333

0.567