Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | GYM75_RS01975 | Genome accession | NZ_CP048264 |
| Coordinates | 425748..426068 (+) | Length | 106 a.a. |
| NCBI ID | WP_220216509.1 | Uniprot ID | - |
| Organism | Gilliamella sp. ESL0441 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 420748..431068
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GYM75_RS01965 (GYM75_01965) | lon | 421172..423607 (+) | 2436 | WP_220216507.1 | endopeptidase La | - |
| GYM75_RS01970 (GYM75_01970) | - | 423737..425587 (+) | 1851 | WP_220216508.1 | SurA N-terminal domain-containing protein | - |
| GYM75_RS01975 (GYM75_01975) | comEA/comE1 | 425748..426068 (+) | 321 | WP_220216509.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| GYM75_RS01980 (GYM75_01980) | priA | 426111..428279 (-) | 2169 | WP_220216510.1 | primosomal protein N' | - |
| GYM75_RS01985 (GYM75_01985) | moaC | 428469..428951 (+) | 483 | WP_220216511.1 | cyclic pyranopterin monophosphate synthase MoaC | - |
| GYM75_RS01990 (GYM75_01990) | moaD | 428964..429209 (+) | 246 | WP_220216512.1 | molybdopterin synthase sulfur carrier subunit | - |
| GYM75_RS01995 (GYM75_01995) | moaE | 429211..429654 (+) | 444 | WP_220216513.1 | molybdopterin synthase catalytic subunit MoaE | - |
| GYM75_RS02000 (GYM75_02000) | - | 429714..430412 (+) | 699 | WP_220216514.1 | Bax inhibitor-1/YccA family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11578.46 Da Isoelectric Point: 9.5169
>NTDB_id=420295 GYM75_RS01975 WP_220216509.1 425748..426068(+) (comEA/comE1) [Gilliamella sp. ESL0441]
MKLFSLLSILLSTLAFSTMSLADSSTVETTKQESVKQEQKQIIQVNINTATAEELTKILTGIGKSKAIKIVEYREKYGPF
VSIEQLKEVSGIGQATLDKNAGKITL
MKLFSLLSILLSTLAFSTMSLADSSTVETTKQESVKQEQKQIIQVNINTATAEELTKILTGIGKSKAIKIVEYREKYGPF
VSIEQLKEVSGIGQATLDKNAGKITL
Nucleotide
Download Length: 321 bp
>NTDB_id=420295 GYM75_RS01975 WP_220216509.1 425748..426068(+) (comEA/comE1) [Gilliamella sp. ESL0441]
ATGAAGTTATTTTCACTATTATCAATTTTATTATCCACACTTGCTTTTTCAACAATGTCTTTGGCTGATTCTTCTACAGT
AGAAACAACGAAACAAGAATCAGTTAAACAAGAACAAAAGCAAATTATTCAGGTAAATATAAACACGGCAACGGCAGAAG
AATTAACGAAGATATTAACAGGAATAGGTAAAAGTAAAGCCATAAAAATTGTTGAATACCGTGAAAAATATGGTCCATTT
GTTTCGATAGAACAACTTAAAGAAGTATCGGGTATAGGTCAAGCGACATTAGATAAAAATGCAGGAAAAATAACATTATA
A
ATGAAGTTATTTTCACTATTATCAATTTTATTATCCACACTTGCTTTTTCAACAATGTCTTTGGCTGATTCTTCTACAGT
AGAAACAACGAAACAAGAATCAGTTAAACAAGAACAAAAGCAAATTATTCAGGTAAATATAAACACGGCAACGGCAGAAG
AATTAACGAAGATATTAACAGGAATAGGTAAAAGTAAAGCCATAAAAATTGTTGAATACCGTGAAAAATATGGTCCATTT
GTTTCGATAGAACAACTTAAAGAAGTATCGGGTATAGGTCAAGCGACATTAGATAAAAATGCAGGAAAAATAACATTATA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
46.789 |
100 |
0.481 |
| comEA | Vibrio cholerae C6706 |
47.525 |
95.283 |
0.453 |
| comEA | Vibrio cholerae strain A1552 |
47.525 |
95.283 |
0.453 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
42.727 |
100 |
0.443 |
| comEA | Vibrio campbellii strain DS40M4 |
42.708 |
90.566 |
0.387 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
42.708 |
90.566 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
39.216 |
96.226 |
0.377 |
| comEA | Legionella pneumophila strain ERS1305867 |
39.216 |
96.226 |
0.377 |