Detailed information NTG0041800

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: SALIVB_RS01450
• Genome accession: NC_015760
• Coordinates: 268299..269198 (+)
• Length: 299 a.a.
• NCBI ID: WP_013990039.1
• Uniprot ID: -
• Organism: Streptococcus salivarius CCHSS3
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 263299..274198

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SALIVB_RS01430 (SALIVB_0284)	trkA	264465..265814 (-)	1350	WP_013990035.1	Trk system potassium transporter TrkA	-
SALIVB_RS01435 (SALIVB_0285)	-	266092..266601 (+)	510	WP_013990036.1	tRNA (cytidine(34)-2'-O)-methyltransferase	-
SALIVB_RS01440 (SALIVB_0286)	-	266910..267467 (+)	558	WP_013990037.1	ECF transporter S component	-
SALIVB_RS01445 (SALIVB_0287)	-	267470..268120 (+)	651	WP_013990038.1	phosphatase PAP2 family protein	-
SALIVB_RS01450 (SALIVB_0288)	comR	268299..269198 (+)	900	WP_013990039.1	helix-turn-helix transcriptional regulator	Regulator
SALIVB_RS01455 (SALIVB_0289)	comA	269373..271469 (+)	2097	WP_013990040.1	peptide cleavage/export ABC transporter	Regulator
SALIVB_RS01460 (SALIVB_0290)	-	271579..271911 (+)	333	WP_013990041.1	DUF805 domain-containing protein	-
SALIVB_RS11160 (SALIVB_0291)	-	271963..272382 (-)	420	WP_231844793.1	hypothetical protein	-
SALIVB_RS01470 (SALIVB_0292)	-	272770..273285 (+)	516	WP_002886548.1	AmiS/UreI family transporter	-
SALIVB_RS01475 (SALIVB_0293)	-	273310..273612 (+)	303	WP_002886558.1	urease subunit gamma	-
SALIVB_RS01480 (SALIVB_0294)	-	273624..273935 (+)	312	WP_002886559.1	urease subunit beta	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35244.71 Da
• Isoelectric Point: 5.5610

>NTDB_id=41800 SALIVB_RS01450 WP_013990039.1 268299..269198(+) (comR) [Streptococcus salivarius CCHSS3]
MNIKDSIGLRIKTERERQQMSREVLCLDGAELTVRQLIRIEKGESLPSLDRLSYIAKRLGKNMADLLDHDNITIPDEYYE
MKNRLIKFPTYRNPERIKDKLALIEEVYEKFFELLPEEELLTLDILENILSFTSWEESPKVEEIYEDLFEQVKRKKKFST
NDLLVIDYYFFHLYGRKQYDKKLFERIVKRVLNQEIWTDDVHNIVLFNDLMAIAALKIFHNSFSDFLTVVDKALAVIEKS
QFYSYKPSVFVLKAKYELLHKENKKKAAENYDKAIMFASVLEDSVLEESIKAGKAADGL

Nucleotide

• Length: 900 bp

>NTDB_id=41800 SALIVB_RS01450 WP_013990039.1 268299..269198(+) (comR) [Streptococcus salivarius CCHSS3]
TTGAACATAAAAGACAGCATTGGACTAAGAATTAAAACTGAGCGTGAACGTCAGCAGATGTCACGTGAGGTGCTATGTTT
AGATGGTGCGGAGTTGACTGTTCGCCAGTTAATTCGCATTGAAAAAGGGGAATCTCTCCCGTCTTTAGATAGACTATCTT
ACATCGCAAAACGTCTAGGAAAAAATATGGCCGATCTATTGGATCATGACAATATTACTATCCCTGATGAATATTATGAG
ATGAAGAATCGTTTGATTAAGTTTCCAACGTACAGAAACCCAGAAAGAATAAAGGATAAACTTGCCTTAATTGAGGAAGT
CTATGAGAAATTCTTTGAACTTCTTCCAGAAGAAGAACTATTAACTCTAGATATTTTGGAAAATATATTAAGTTTCACTA
GTTGGGAGGAGAGTCCAAAGGTTGAGGAAATATATGAAGATTTATTTGAACAGGTCAAAAGGAAGAAGAAATTCTCAACT
AACGATTTATTAGTTATTGACTATTATTTCTTCCATCTTTATGGAAGAAAACAGTATGACAAAAAACTTTTTGAAAGAAT
CGTAAAGAGAGTATTAAATCAGGAAATTTGGACAGATGATGTCCATAATATTGTTTTATTTAATGATTTGATGGCTATTG
CTGCTTTGAAGATTTTTCACAATTCCTTTTCAGACTTCTTAACAGTTGTGGATAAAGCATTAGCCGTTATAGAAAAATCA
CAATTCTATAGCTATAAACCTAGTGTTTTTGTTCTCAAAGCTAAATATGAACTTCTGCATAAGGAAAATAAGAAAAAGGC
TGCAGAGAATTACGATAAGGCCATAATGTTTGCTTCCGTTTTAGAAGACTCGGTTTTAGAAGAAAGTATAAAAGCAGGGA
AAGCGGCAGATGGTTTATAG

Domains

Predicted by InterproScan.

• ComR tetratricopeptide (ComR_TPR) (75-292)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus salivarius strain HSISS4	97.324	100	0.973
comR	Streptococcus salivarius SK126	96.656	100	0.967
comR	Streptococcus thermophilus LMG 18311	94.983	100	0.95
comR	Streptococcus thermophilus LMD-9	94.314	100	0.943
comR/comR1	Streptococcus sobrinus strain NIDR 6715-7	42.14	100	0.421
comR/comR2	Streptococcus sobrinus strain NIDR 6715-7	42.14	100	0.421