Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | E3T07_RS04590 | Genome accession | NZ_CP047781 |
| Coordinates | 904879..905949 (-) | Length | 356 a.a. |
| NCBI ID | WP_000776412.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_1452 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 899879..910949
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3T07_RS04550 (E3T07_04550) | gcvPA | 900056..901402 (-) | 1347 | WP_160191381.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| E3T07_RS04555 (E3T07_04555) | gcvT | 901422..902513 (-) | 1092 | WP_000093347.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| E3T07_RS04560 (E3T07_04560) | - | 902672..903196 (-) | 525 | WP_001015125.1 | shikimate kinase | - |
| E3T07_RS04565 (E3T07_04565) | - | 903186..903332 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| E3T07_RS04570 (E3T07_04570) | comGF | 903429..903926 (-) | 498 | WP_001794055.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| E3T07_RS04575 (E3T07_04575) | comGE | 903844..904143 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| E3T07_RS04580 (E3T07_04580) | comGD | 904130..904576 (-) | 447 | WP_001791207.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| E3T07_RS04585 (E3T07_04585) | comGC | 904554..904865 (-) | 312 | WP_000472257.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| E3T07_RS04590 (E3T07_04590) | comGB | 904879..905949 (-) | 1071 | WP_000776412.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| E3T07_RS04595 (E3T07_04595) | comGA | 905921..906895 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| E3T07_RS04600 (E3T07_04600) | - | 906947..907570 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| E3T07_RS04605 (E3T07_04605) | - | 907567..907896 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| E3T07_RS04610 (E3T07_04610) | - | 907896..908882 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| E3T07_RS04615 (E3T07_04615) | - | 908879..909082 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
| E3T07_RS04620 (E3T07_04620) | - | 909063..910526 (-) | 1464 | WP_001017873.1 | rhomboid family protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 41429.85 Da Isoelectric Point: 10.1030
>NTDB_id=415917 E3T07_RS04590 WP_000776412.1 904879..905949(-) (comGB) [Staphylococcus aureus strain UP_1452]
MKLQWINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGTTILSEISNGAPCNKILSLIG
YSDTIVLQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLS
SFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNNLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIK
QTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
MKLQWINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGTTILSEISNGAPCNKILSLIG
YSDTIVLQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLS
SFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNNLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIK
QTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
Nucleotide
Download Length: 1071 bp
>NTDB_id=415917 E3T07_RS04590 WP_000776412.1 904879..905949(-) (comGB) [Staphylococcus aureus strain UP_1452]
GTGAAACTACAATGGATAAATACATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAGGCCCAACAAATCGATTTACT
TTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTGTATCAAAGTTTTCAATTTTTAAATCTTCAAATGACATATA
AAAATAAGCAATTAGGTACCACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAATAAGATATTATCACTGATAGGT
TATAGCGATACTATCGTCCTGCAAGTATATTTGGCAGAAAGATTTGGCAATATCATAGACGTTCTAGAAGAAACCGTAAA
TTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTAAAGACACTGCAATACCCCTTAATACTAGTTTCTATTTTTA
TTGCTATGATTATTATATTAAACCTCACAGTAATTCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
TCTTTTCAAAAAACATTGTCTTTTTTCATTACCAGCTTACCTACTATAATTGTAGTAATGCTCATAATAGTATCTATGTT
GGCTATTATTATGAAATTAATTTATAACAATTTAAATATGCTCAATAAGATAAACTTTGTGATGAAACTACCGCTAATAT
CAGGCTATTTCCAATTATTTAAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACACTTCAA
TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAATACTTATTAACTTATTCAGA
AATGGGATATGGTTTGCCTCAAATTTTAGAAAAACTAAAATGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTG
AAAAGAGAGGGAAGCTAGAAGTAGAACTAAAGTTATATTCGCAAATATTAGTAAAACAAATAGAAGATAAAGCGATAAAA
CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACC
GATGTTTCAAATGATGCAAAGTATAAAATAA
GTGAAACTACAATGGATAAATACATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAGGCCCAACAAATCGATTTACT
TTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTGTATCAAAGTTTTCAATTTTTAAATCTTCAAATGACATATA
AAAATAAGCAATTAGGTACCACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAATAAGATATTATCACTGATAGGT
TATAGCGATACTATCGTCCTGCAAGTATATTTGGCAGAAAGATTTGGCAATATCATAGACGTTCTAGAAGAAACCGTAAA
TTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTAAAGACACTGCAATACCCCTTAATACTAGTTTCTATTTTTA
TTGCTATGATTATTATATTAAACCTCACAGTAATTCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
TCTTTTCAAAAAACATTGTCTTTTTTCATTACCAGCTTACCTACTATAATTGTAGTAATGCTCATAATAGTATCTATGTT
GGCTATTATTATGAAATTAATTTATAACAATTTAAATATGCTCAATAAGATAAACTTTGTGATGAAACTACCGCTAATAT
CAGGCTATTTCCAATTATTTAAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACACTTCAA
TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAATACTTATTAACTTATTCAGA
AATGGGATATGGTTTGCCTCAAATTTTAGAAAAACTAAAATGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTG
AAAAGAGAGGGAAGCTAGAAGTAGAACTAAAGTTATATTCGCAAATATTAGTAAAACAAATAGAAGATAAAGCGATAAAA
CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACC
GATGTTTCAAATGATGCAAAGTATAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Staphylococcus aureus MW2 |
99.438 |
100 |
0.994 |
| comGB | Staphylococcus aureus N315 |
99.438 |
100 |
0.994 |