Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   H7793_RS03890 Genome accession   NZ_CP060642
Coordinates   734594..734776 (+) Length   60 a.a.
NCBI ID   WP_011184726.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY1312     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 729594..739776
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7793_RS03855 (H7793_03855) - 729835..730272 (+) 438 WP_011106643.1 DUF1617 family protein -
  H7793_RS03860 (H7793_03860) - 730269..730886 (+) 618 WP_011184056.1 DUF1366 domain-containing protein -
  H7793_RS03865 (H7793_03865) - 730896..731168 (+) 273 WP_002986916.1 hypothetical protein -
  H7793_RS03870 (H7793_03870) - 731165..731392 (+) 228 WP_000609113.1 phage holin -
  H7793_RS03875 (H7793_03875) - 731508..732710 (+) 1203 WP_010922095.1 glucosaminidase domain-containing protein -
  H7793_RS03880 (H7793_03880) speC 732778..733485 (-) 708 WP_002988478.1 streptococcal pyrogenic exotoxin SpeC -
  H7793_RS03885 (H7793_03885) mf2 733596..734354 (-) 759 WP_011184727.1 DNase Mf2 -
  H7793_RS03890 (H7793_03890) prx 734594..734776 (+) 183 WP_011184726.1 hypothetical protein Regulator
  H7793_RS03895 (H7793_03895) - 735308..737170 (+) 1863 WP_002989131.1 heavy metal translocating P-type ATPase -
  H7793_RS03900 (H7793_03900) - 737470..738405 (-) 936 WP_002989136.1 dihydroorotate oxidase -
  H7793_RS03905 (H7793_03905) - 738644..739339 (+) 696 WP_002983928.1 phosphoglycerate mutase -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6936.91 Da        Isoelectric Point: 4.1954

>NTDB_id=415885 H7793_RS03890 WP_011184726.1 734594..734776(+) (prx) [Streptococcus pyogenes strain TSPY1312]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPNEKIKNGEIVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=415885 H7793_RS03890 WP_011184726.1 734594..734776(+) (prx) [Streptococcus pyogenes strain TSPY1312]
ATGCTAACATACGACGAATTTAAACAAGCAATTGACAATGGATATATCACAGCAGACACAGTAATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGAATGAGAAGATAAAGAATGGAGAAATTGTGACAGACGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

98.333

100

0.983

  prx Streptococcus pyogenes MGAS8232

86.667

100

0.867

  prx Streptococcus pyogenes MGAS315

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

75

100

0.75

  prx Streptococcus pyogenes MGAS315

83.721

71.667

0.6

  prx Streptococcus pyogenes MGAS315

85.366

68.333

0.583

  prx Streptococcus pyogenes MGAS315

71.429

70

0.5