Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   H7798_RS06280 Genome accession   NZ_CP060638
Coordinates   1275582..1275764 (-) Length   60 a.a.
NCBI ID   WP_003056293.1    Uniprot ID   A0ABU0A7A8
Organism   Streptococcus pyogenes strain TSPY141     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1270582..1280764
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7798_RS06260 (H7798_06290) - 1270985..1271701 (-) 717 WP_030126381.1 B3/4 domain-containing protein -
  H7798_RS06265 (H7798_06295) - 1271715..1272794 (-) 1080 WP_030126380.1 MmcQ/YjbR family DNA-binding protein -
  H7798_RS06270 (H7798_06300) - 1272867..1274600 (-) 1734 WP_111717976.1 sensor histidine kinase -
  H7798_RS06275 (H7798_06305) - 1274597..1275337 (-) 741 WP_111717978.1 response regulator -
  H7798_RS06280 (H7798_06310) prx 1275582..1275764 (-) 183 WP_003056293.1 hypothetical protein Regulator
  H7798_RS06285 (H7798_06315) - 1276003..1276803 (+) 801 WP_021340119.1 DNA/RNA non-specific endonuclease -
  H7798_RS06290 (H7798_06320) - 1277425..1278630 (-) 1206 WP_085613963.1 glucosaminidase domain-containing protein -
  H7798_RS06295 (H7798_06325) - 1278746..1278973 (-) 228 WP_003058873.1 phage holin -
  H7798_RS06300 (H7798_06330) - 1278970..1279242 (-) 273 WP_085613962.1 hypothetical protein -
  H7798_RS06305 (H7798_06335) - 1279252..1279869 (-) 618 WP_085613961.1 DUF1366 domain-containing protein -
  H7798_RS06310 (H7798_06340) - 1279872..1280303 (-) 432 WP_228653621.1 DUF1617 family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6877.91 Da        Isoelectric Point: 4.2840

>NTDB_id=415522 H7798_RS06280 WP_003056293.1 1275582..1275764(-) (prx) [Streptococcus pyogenes strain TSPY141]
MLTYDEFKQAIDHGYITGDTVAIVRKNGQIFDYVLPGEPVKPWEILTEVIVEAVLRELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=415522 H7798_RS06280 WP_003056293.1 1275582..1275764(-) (prx) [Streptococcus pyogenes strain TSPY141]
ATGCTAACATACGACGAATTTAAGCAAGCAATCGACCATGGGTATATCACAGGAGACACAGTAGCGATTGTGCGCAAAAA
CGGACAGATCTTTGATTATGTGTTGCCTGGTGAGCCTGTGAAACCGTGGGAAATTTTGACTGAAGTAATAGTAGAAGCAG
TGCTGAGGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783
  prx Streptococcus pyogenes MGAS8232

73.333

100

0.733
  prx Streptococcus pyogenes MGAS315

73.333

100

0.733
  prx Streptococcus pyogenes MGAS315

73.333

100

0.733
  prx Streptococcus pyogenes MGAS315

82.927

68.333

0.567
  prx Streptococcus pyogenes MGAS315

78.049

68.333

0.533