Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | GSN03_RS24660 | Genome accession | NZ_CP047366 |
| Coordinates | 4755945..4756526 (+) | Length | 193 a.a. |
| NCBI ID | WP_001049163.1 | Uniprot ID | A0A366GQ86 |
| Organism | Bacillus nitratireducens strain BM02 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4750945..4761526
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GSN03_RS24625 (GSN03_24440) | - | 4751940..4752146 (+) | 207 | WP_000216167.1 | DUF1657 domain-containing protein | - |
| GSN03_RS24630 (GSN03_24445) | - | 4752240..4752725 (+) | 486 | WP_212088491.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| GSN03_RS24635 (GSN03_24450) | spoVAC | 4752755..4753231 (+) | 477 | WP_000095399.1 | stage V sporulation protein AC | - |
| GSN03_RS24640 (GSN03_24455) | spoVAD | 4753232..4754248 (+) | 1017 | WP_212088492.1 | stage V sporulation protein AD | - |
| GSN03_RS24645 (GSN03_24460) | spoVAE | 4754245..4754595 (+) | 351 | WP_000575919.1 | stage V sporulation protein AE | - |
| GSN03_RS24650 (GSN03_24465) | - | 4754607..4754813 (+) | 207 | WP_000215893.1 | DUF1657 domain-containing protein | - |
| GSN03_RS24655 (GSN03_24470) | - | 4754834..4755703 (+) | 870 | WP_000018902.1 | DUF421 domain-containing protein | - |
| GSN03_RS24660 (GSN03_24475) | clpP | 4755945..4756526 (+) | 582 | WP_001049163.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| GSN03_RS24665 (GSN03_24480) | - | 4756786..4757034 (-) | 249 | WP_000250255.1 | HPr family phosphocarrier protein | - |
| GSN03_RS24670 (GSN03_24485) | whiA | 4757058..4758008 (-) | 951 | WP_212088493.1 | DNA-binding protein WhiA | - |
| GSN03_RS24675 (GSN03_24490) | - | 4758097..4759050 (-) | 954 | WP_212088494.1 | gluconeogenesis factor YvcK family protein | - |
| GSN03_RS24680 (GSN03_24495) | rapZ | 4759054..4759935 (-) | 882 | WP_000138460.1 | RNase adapter RapZ | - |
| GSN03_RS24685 (GSN03_24500) | - | 4759956..4760414 (-) | 459 | WP_001190080.1 | NUDIX hydrolase | - |
| GSN03_RS24690 (GSN03_24505) | - | 4760629..4761435 (-) | 807 | WP_212088495.1 | DUF368 domain-containing protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21447.68 Da Isoelectric Point: 5.0423
>NTDB_id=413057 GSN03_RS24660 WP_001049163.1 4755945..4756526(+) (clpP) [Bacillus nitratireducens strain BM02]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAERALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAERALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=413057 GSN03_RS24660 WP_001049163.1 4755945..4756526(+) (clpP) [Bacillus nitratireducens strain BM02]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATTTACGATACA
ATGCAATTTATTAAACCACAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGCGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCTAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTTCTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAGAGCTCTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATTTACGATACA
ATGCAATTTATTAAACCACAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGCGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCTAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTTCTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAGAGCTCTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
90.104 |
99.482 |
0.896 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.021 |
97.409 |
0.653 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
58.854 |
99.482 |
0.585 |
| clpP | Streptococcus pneumoniae D39 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae Rx1 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae R6 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.292 |
99.482 |
0.57 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pyogenes JRS4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus mutans UA159 |
55.44 |
100 |
0.554 |