Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | VAA_RS09675 | Genome accession | NC_015633 |
| Coordinates | 2113633..2113932 (-) | Length | 99 a.a. |
| NCBI ID | WP_017047776.1 | Uniprot ID | A0A1Y0NUT1 |
| Organism | Vibrio anguillarum 775 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2108633..2118932
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VAA_RS09650 (VAA_02286) | lapB | 2109048..2110217 (-) | 1170 | WP_026028046.1 | lipopolysaccharide assembly protein LapB | - |
| VAA_RS09655 (VAA_02287) | - | 2110237..2110512 (-) | 276 | WP_013857177.1 | LapA family protein | - |
| VAA_RS09660 (VAA_02288) | ihfB | 2110654..2110938 (-) | 285 | WP_010317449.1 | integration host factor subunit beta | - |
| VAA_RS09665 (VAA_02289) | rpsA | 2111015..2112685 (-) | 1671 | WP_013857179.1 | 30S ribosomal protein S1 | - |
| VAA_RS09670 (VAA_02290) | cmk | 2112789..2113469 (-) | 681 | WP_013857180.1 | (d)CMP kinase | - |
| VAA_RS09675 (VAA_02292) | comEA | 2113633..2113932 (-) | 300 | WP_017047776.1 | ComEA family DNA-binding protein | Machinery gene |
| VAA_RS09680 (VAA_02293) | ppiD | 2114069..2115934 (-) | 1866 | WP_013857182.1 | peptidylprolyl isomerase | - |
| VAA_RS09685 (VAA_02294) | - | 2116092..2116364 (-) | 273 | WP_026027116.1 | HU family DNA-binding protein | - |
| VAA_RS09690 (VAA_02295) | lon | 2116560..2118911 (-) | 2352 | WP_013857184.1 | endopeptidase La | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10804.74 Da Isoelectric Point: 9.6909
>NTDB_id=41143 VAA_RS09675 WP_017047776.1 2113633..2113932(-) (comEA) [Vibrio anguillarum 775]
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAVTVRQNAERIIL
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAVTVRQNAERIIL
Nucleotide
Download Length: 300 bp
>NTDB_id=41143 VAA_RS09675 WP_017047776.1 2113633..2113932(-) (comEA) [Vibrio anguillarum 775]
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGTTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGTTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
59.223 |
100 |
0.616 |
| comEA | Vibrio cholerae strain A1552 |
59.223 |
100 |
0.616 |
| comEA | Vibrio campbellii strain DS40M4 |
58.163 |
98.99 |
0.576 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
58.889 |
90.909 |
0.535 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
39.286 |
100 |
0.444 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
40 |
100 |
0.444 |
| comEA | Legionella pneumophila str. Paris |
36.735 |
98.99 |
0.364 |
| comEA | Legionella pneumophila strain ERS1305867 |
36.735 |
98.99 |
0.364 |