Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | SGPB_RS08055 | Genome accession | NC_015600 |
| Coordinates | 1634921..1635511 (-) | Length | 196 a.a. |
| NCBI ID | WP_003066032.1 | Uniprot ID | A0AAW6YFC2 |
| Organism | Streptococcus pasteurianus ATCC 43144 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1629921..1640511
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SGPB_RS08025 (SGPB_1567) | - | 1630194..1630958 (-) | 765 | WP_003066020.1 | ABC transporter ATP-binding protein | - |
| SGPB_RS08030 (SGPB_1568) | - | 1630958..1631911 (-) | 954 | WP_003066023.1 | branched-chain amino acid ABC transporter permease | - |
| SGPB_RS08035 (SGPB_1569) | - | 1631915..1632799 (-) | 885 | WP_003066025.1 | branched-chain amino acid ABC transporter permease | - |
| SGPB_RS08040 (SGPB_1570) | - | 1632851..1634032 (-) | 1182 | WP_003066027.1 | ABC transporter substrate-binding protein | - |
| SGPB_RS08045 (SGPB_1571) | - | 1634142..1634393 (-) | 252 | WP_003066029.1 | YlbG family protein | - |
| SGPB_RS08050 (SGPB_1572) | - | 1634386..1634829 (-) | 444 | WP_003066031.1 | YlbF family regulator | - |
| SGPB_RS08055 (SGPB_1573) | clpP | 1634921..1635511 (-) | 591 | WP_003066032.1 | ATP-dependent Clp protease proteolytic subunit ClpP | Regulator |
| SGPB_RS08060 (SGPB_1574) | upp | 1635872..1636501 (-) | 630 | WP_003066034.1 | uracil phosphoribosyltransferase | - |
| SGPB_RS08065 (SGPB_1575) | - | 1636659..1637822 (-) | 1164 | WP_003066036.1 | MalY/PatB family protein | - |
| SGPB_RS08070 (SGPB_1576) | - | 1637824..1638918 (-) | 1095 | WP_003066037.1 | cystathionine gamma-synthase | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21494.45 Da Isoelectric Point: 4.3383
>NTDB_id=41088 SGPB_RS08055 WP_003066032.1 1634921..1635511(-) (clpP) [Streptococcus pasteurianus ATCC 43144]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRQNLEQILADNSGQ
TLEKVHADAERDNWMSAQETLEYGFIDEIMVNNELN
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRQNLEQILADNSGQ
TLEKVHADAERDNWMSAQETLEYGFIDEIMVNNELN
Nucleotide
Download Length: 591 bp
>NTDB_id=41088 SGPB_RS08055 WP_003066032.1 1634921..1635511(-) (clpP) [Streptococcus pasteurianus ATCC 43144]
ATGATTCCTGTAGTTATTGAACAAACGAGCCGTGGCGAACGCTCATACGATATTTATTCACGCCTTTTGAAAGACCGTAT
TATCATGTTGACTGGACCAGTTGAAGATAATATGGCTAACTCTATCATTGCCCAATTGTTGTTCCTTGATGCACAAGATA
ACACTAAAGATATTTACCTTTATGTTAATACTCCTGGTGGTTCAGTATCAGCAGGGCTTGCCATTGTTGATACAATGAAT
TTCATTAAGTCAGATGTTCAAACAATTGTTATGGGTATGGCAGCTTCAATGGGAACTGTTATTGCGTCATCAGGTGCAAA
AGGTAAACGTTTCATGTTGCCAAATGCTGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGCGGTACACAACAAA
CAGATATGGCAATTGCTGCCGAACACCTTTTGAAAACACGTCAAAACTTGGAACAAATTTTGGCTGACAACTCTGGTCAA
ACATTGGAAAAAGTTCATGCTGATGCTGAACGTGATAACTGGATGAGTGCACAAGAAACTCTCGAATACGGCTTCATCGA
CGAAATCATGGTAAACAACGAATTAAACTAA
ATGATTCCTGTAGTTATTGAACAAACGAGCCGTGGCGAACGCTCATACGATATTTATTCACGCCTTTTGAAAGACCGTAT
TATCATGTTGACTGGACCAGTTGAAGATAATATGGCTAACTCTATCATTGCCCAATTGTTGTTCCTTGATGCACAAGATA
ACACTAAAGATATTTACCTTTATGTTAATACTCCTGGTGGTTCAGTATCAGCAGGGCTTGCCATTGTTGATACAATGAAT
TTCATTAAGTCAGATGTTCAAACAATTGTTATGGGTATGGCAGCTTCAATGGGAACTGTTATTGCGTCATCAGGTGCAAA
AGGTAAACGTTTCATGTTGCCAAATGCTGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGCGGTACACAACAAA
CAGATATGGCAATTGCTGCCGAACACCTTTTGAAAACACGTCAAAACTTGGAACAAATTTTGGCTGACAACTCTGGTCAA
ACATTGGAAAAAGTTCATGCTGATGCTGAACGTGATAACTGGATGAGTGCACAAGAAACTCTCGAATACGGCTTCATCGA
CGAAATCATGGTAAACAACGAATTAAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
95.385 |
99.49 |
0.949 |
| clpP | Streptococcus thermophilus LMD-9 |
95.385 |
99.49 |
0.949 |
| clpP | Streptococcus pneumoniae Rx1 |
94.388 |
100 |
0.944 |
| clpP | Streptococcus pneumoniae D39 |
94.388 |
100 |
0.944 |
| clpP | Streptococcus pneumoniae R6 |
94.388 |
100 |
0.944 |
| clpP | Streptococcus pneumoniae TIGR4 |
94.388 |
100 |
0.944 |
| clpP | Streptococcus pyogenes JRS4 |
90.306 |
100 |
0.903 |
| clpP | Streptococcus pyogenes MGAS315 |
90.306 |
100 |
0.903 |
| clpP | Streptococcus mutans UA159 |
88.265 |
100 |
0.883 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
86.735 |
100 |
0.867 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
86.224 |
100 |
0.862 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
58.763 |
98.98 |
0.582 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
59.474 |
96.939 |
0.577 |