Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   GQ677_RS01920 Genome accession   NZ_CP047120
Coordinates   363438..363989 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 1085     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 358438..368989
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GQ677_RS01920 (GQ677_01920) comX/sigX/comX2/sigX2 363438..363989 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  GQ677_RS01925 (GQ677_01925) truA 364174..364923 (+) 750 WP_002988132.1 tRNA pseudouridine(38-40) synthase TruA -
  GQ677_RS01930 (GQ677_01930) - 364913..365677 (+) 765 WP_002988136.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  GQ677_RS01935 (GQ677_01935) - 365667..366137 (+) 471 WP_002988139.1 ECF transporter S component -
  GQ677_RS01940 (GQ677_01940) - 366151..366711 (+) 561 WP_002995157.1 TIGR01440 family protein -
  GQ677_RS01945 (GQ677_01945) - 366776..367621 (-) 846 WP_159330798.1 mechanosensitive ion channel family protein -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=410725 GQ677_RS01920 WP_010921894.1 363438..363989(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain 1085]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=410725 GQ677_RS01920 WP_010921894.1 363438..363989(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain 1085]
ATGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.