Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   H1A19_RS03420 Genome accession   NZ_CP059383
Coordinates   604067..604246 (+) Length   59 a.a.
NCBI ID   WP_000965655.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain BJ01     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 599067..609246
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1A19_RS03390 (H1A19_03390) - 600416..600742 (+) 327 WP_000404431.1 DUF1366 domain-containing protein -
  H1A19_RS03395 (H1A19_03395) - 600717..600929 (+) 213 WP_000698337.1 hypothetical protein -
  H1A19_RS03400 (H1A19_03400) - 600942..601244 (+) 303 WP_000215499.1 hypothetical protein -
  H1A19_RS03405 (H1A19_03405) - 601246..601500 (+) 255 WP_000611524.1 phage holin -
  H1A19_RS03410 (H1A19_03410) - 601626..602960 (+) 1335 WP_000257233.1 GH25 family lysozyme -
  H1A19_RS03415 (H1A19_03415) - 603326..603838 (+) 513 WP_000634505.1 PBECR4 domain-containing protein -
  H1A19_RS03420 (H1A19_03420) prx 604067..604246 (+) 180 WP_000965655.1 hypothetical protein Regulator
  H1A19_RS03425 (H1A19_03425) - 604346..604927 (-) 582 WP_025193995.1 site-specific integrase -
  H1A19_RS03430 (H1A19_03430) - 604963..605229 (-) 267 WP_001872365.1 hypothetical protein -
  H1A19_RS11100 - 605235..606612 (+) 1378 Protein_596 IS3 family transposase -
  H1A19_RS03455 (H1A19_03455) - 606785..606946 (-) 162 WP_000508795.1 TM2 domain-containing protein -
  H1A19_RS03460 (H1A19_03460) - 607688..608965 (+) 1278 WP_000594360.1 ABC transporter permease -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 6937.90 Da        Isoelectric Point: 4.3219

>NTDB_id=410184 H1A19_RS03420 WP_000965655.1 604067..604246(+) (prx) [Streptococcus agalactiae strain BJ01]
MLYIDELQEAIDKGYISGNTVAIVRKNGKIFDYVLPHEEVREEEVVTVERVEDVMRELR

Nucleotide


Download         Length: 180 bp        

>NTDB_id=410184 H1A19_RS03420 WP_000965655.1 604067..604246(+) (prx) [Streptococcus agalactiae strain BJ01]
ATGTTATATATAGATGAGCTACAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGTGCGTAAGAA
CGGAAAGATATTTGATTATGTGTTACCACACGAAGAAGTGAGAGAAGAAGAGGTTGTGACAGTTGAGAGAGTGGAAGACG
TTATGAGAGAATTGAGGTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

70.69

98.305

0.695
  prx Streptococcus pyogenes MGAS8232

67.241

98.305

0.661
  prx Streptococcus pyogenes MGAS315

67.241

98.305

0.661
  prx Streptococcus pyogenes MGAS315

83.721

72.881

0.61
  prx Streptococcus pyogenes MGAS315

60.345

98.305

0.593
  prx Streptococcus pyogenes MGAS315

73.171

69.492

0.508
  prx Streptococcus pyogenes MGAS315

69.767

72.881

0.508