Detailed information NTG0040934

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: METME_RS21430
• Genome accession: NC_015572
• Coordinates: 4704576..4705571 (-)
• Length: 331 a.a.
• NCBI ID: WP_238527393.1
• Uniprot ID: -
• Organism: Methylomonas methanica MC09
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 4699576..4710571

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
METME_RS21405 (Metme_4263)	tig	4699723..4701024 (-)	1302	WP_013820828.1	trigger factor	-
METME_RS21415 (Metme_4264)	-	4701288..4701749 (+)	462	WP_013820829.1	DUF192 domain-containing protein	-
METME_RS21420 (Metme_4265)	topA	4701765..4704083 (-)	2319	WP_013820830.1	type I DNA topoisomerase	-
METME_RS21425 (Metme_4266)	-	4704100..4704567 (-)	468	WP_013820831.1	DUF494 domain-containing protein	-
METME_RS21430 (Metme_4267)	dprA	4704576..4705571 (-)	996	WP_238527393.1	DNA-processing protein DprA	Machinery gene
METME_RS21435 (Metme_4268)	-	4705730..4706773 (-)	1044	WP_013820833.1	LysM peptidoglycan-binding domain-containing protein	-
METME_RS21440 (Metme_4269)	-	4706927..4707895 (-)	969	WP_013820834.1	GDP-L-fucose synthase	-
METME_RS21445 (Metme_4270)	gmd	4707900..4709021 (-)	1122	WP_013820835.1	GDP-mannose 4,6-dehydratase	-
METME_RS21450 (Metme_4271)	-	4709194..4710423 (-)	1230	WP_013820836.1	NADP-dependent isocitrate dehydrogenase	-

Sequence

Protein

• Length: 331 a.a.
• Molecular weight: 35330.36 Da
• Isoelectric Point: 4.8971

>NTDB_id=40934 METME_RS21430 WP_238527393.1 4704576..4705571(-) (dprA) [Methylomonas methanica MC09]
MEHIFQASRATLQGAGFSEKLIAALQSPPWELVEQDLVWLEQPENGAITIEEPEYPEQLKEIADAPPVLFVKGRPEILHS
PQIAMVGSRNPSSIGVKIAIEFAQALAEAGFVITSGMALGIDAASHQGALNAGGLTIAVAGTGLDRVYPACHKALATDIV
ANGALVSEFPPGTKAKTGHFPRRNRIISGLCQGLLVVEAAQQSGSLITARMALEQNREVFAIPGSIHNPLARGCNALIRQ
GAKLVETAQDIFEELGQYNQVYKSIGAQIHQTALDLEQQNLLKLIPYSPITVDNLVQDSGFSVETVSSMLLVLELQGYIA
AAAGGSYYRTQ

Nucleotide

• Length: 996 bp

>NTDB_id=40934 METME_RS21430 WP_238527393.1 4704576..4705571(-) (dprA) [Methylomonas methanica MC09]
ATTGAGCATATCTTTCAAGCATCCCGAGCTACGTTGCAGGGAGCGGGTTTTAGCGAAAAACTCATTGCCGCGCTGCAAAG
CCCTCCCTGGGAATTGGTAGAACAAGATTTAGTCTGGCTTGAGCAGCCCGAAAATGGCGCCATAACGATTGAGGAGCCCG
AATACCCAGAGCAACTAAAGGAAATCGCCGATGCACCGCCGGTGTTGTTTGTCAAAGGGCGGCCTGAAATATTGCATAGT
CCGCAAATTGCCATGGTTGGTAGTCGCAATCCATCCAGTATCGGTGTAAAAATAGCCATTGAGTTTGCTCAGGCATTGGC
AGAGGCGGGGTTTGTGATTACCAGCGGCATGGCTTTGGGCATAGACGCCGCCAGTCATCAGGGGGCATTGAATGCGGGGG
GGCTTACAATTGCGGTGGCGGGTACCGGTTTGGATCGAGTGTACCCAGCCTGTCATAAGGCGTTGGCAACCGATATTGTG
GCTAATGGCGCGTTGGTGTCCGAGTTTCCGCCGGGTACAAAAGCCAAAACCGGACACTTTCCCAGGCGCAATCGAATTAT
CAGCGGCTTATGTCAAGGCTTGTTGGTCGTAGAGGCGGCTCAGCAAAGCGGGTCGTTAATTACCGCGCGGATGGCTTTGG
AGCAAAACCGGGAAGTGTTTGCTATTCCCGGGTCGATTCATAATCCGTTGGCACGCGGTTGTAACGCTTTAATCAGGCAA
GGTGCTAAATTAGTCGAAACGGCACAGGATATTTTTGAAGAATTAGGTCAATACAATCAAGTATATAAGTCGATTGGCGC
ACAAATACATCAGACGGCGCTTGACCTGGAGCAGCAAAATCTATTGAAATTGATTCCGTACAGCCCAATAACAGTTGACA
ATCTGGTCCAGGATAGCGGTTTTTCAGTGGAAACTGTTTCATCGATGCTGCTGGTTCTGGAACTGCAAGGCTACATCGCC
GCGGCCGCCGGCGGTAGCTATTACCGAACCCAATAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (272-325)

• DNA recombination-mediator protein A (DNA_processg_A) (43-246)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio cholerae strain A1552	46.132	100	0.486
dprA	Legionella pneumophila strain ERS1305867	47.416	99.396	0.471
dprA	Vibrio campbellii strain DS40M4	45.697	100	0.465
dprA	Glaesserella parasuis strain SC1401	44.807	100	0.456
dprA	Acinetobacter baylyi ADP1	41.867	100	0.42
dprA	Haemophilus influenzae Rd KW20	46.259	88.822	0.411
dprA	Acinetobacter baumannii strain A118	42.633	96.375	0.411
dprA	Acinetobacter baumannii D1279779	43.042	93.353	0.402