Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   GO596_RS03190 Genome accession   NZ_CP046628
Coordinates   620897..622156 (-) Length   419 a.a.
NCBI ID   WP_157339187.1    Uniprot ID   -
Organism   Streptococcus equinus strain CNU 77-23     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 615897..627156
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO596_RS03165 (GO596_03165) - 615980..616174 (-) 195 WP_004233691.1 DUF951 domain-containing protein -
  GO596_RS03170 (GO596_03170) - 616185..617069 (-) 885 WP_027968263.1 diacylglycerol/lipid kinase family protein -
  GO596_RS03175 (GO596_03175) dnaN 617200..618336 (-) 1137 WP_021143391.1 DNA polymerase III subunit beta -
  GO596_RS03180 (GO596_03180) dnaA 618494..619849 (-) 1356 WP_024344479.1 chromosomal replication initiator protein DnaA -
  GO596_RS03185 (GO596_03185) spo0J 620054..620836 (-) 783 WP_033153625.1 ParB/RepB/Spo0J family partition protein Regulator
  GO596_RS03190 (GO596_03190) htrA 620897..622156 (-) 1260 WP_157339187.1 S1C family serine protease Regulator
  GO596_RS03195 (GO596_03195) rlmH 622369..622848 (+) 480 WP_027968267.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  GO596_RS03215 (GO596_03215) - 623692..626271 (-) 2580 WP_157339188.1 YfhO family protein -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 43508.38 Da        Isoelectric Point: 4.4532

>NTDB_id=406232 GO596_RS03190 WP_157339187.1 620897..622156(-) (htrA) [Streptococcus equinus strain CNU 77-23]
MKKVNFPKVKSKKILKPLSVILIGFIGGVAGTLLILNMAGISINNVSGSSTKTTTSKVSYSNSNDTTKAVSKVQDAVVSV
INYQSNTSSNDLYAQLFGDNANSNNSTSDDDLNISSEGSGVIYKKDGNSAYVVTNNHVVDGAEQLEIMLSDGTKVVGELV
GADTYSDIAVVKIASDKVSTVAEFADSAKITVGETAIAIGSPLGTDYANSVTQGIVSSLSRTVTMTNDDGETISTNAIQT
DAAINPGNSGGALINIEGQVIGINSSKISSTSSSGESVEGMGFAIPSNDVVKIINQLEENGKVIRPALGITMANLSDLST
VSISHLNIPTSVTGGVVVASVQSGMPAEGTLERYDVITAIDDEEVNSITDLQSILYGHSTGDSVKVTFYRGTTKKTETIK
LTKTTQDLSSSSNSSNQNQ

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=406232 GO596_RS03190 WP_157339187.1 620897..622156(-) (htrA) [Streptococcus equinus strain CNU 77-23]
ATGAAAAAAGTCAATTTTCCAAAAGTTAAATCAAAAAAAATTCTCAAGCCGCTGTCTGTCATTTTAATCGGATTCATCGG
AGGTGTAGCTGGGACGCTACTGATTTTAAATATGGCTGGCATTTCGATAAATAACGTTAGCGGTTCAAGCACTAAAACTA
CCACAAGTAAAGTAAGTTATTCAAATTCTAATGATACGACAAAAGCAGTTTCAAAAGTTCAAGACGCTGTCGTATCCGTT
ATTAATTATCAATCAAATACTTCATCAAATGATCTGTACGCTCAATTATTTGGTGATAATGCAAATAGCAACAATTCAAC
ATCTGATGACGATTTAAACATCTCTAGCGAAGGTTCTGGTGTTATTTACAAAAAAGATGGAAATTCTGCCTACGTTGTAA
CAAATAACCACGTCGTTGACGGCGCTGAACAGCTCGAAATCATGCTATCTGATGGTACAAAAGTCGTTGGAGAATTAGTC
GGAGCTGATACTTATTCAGATATTGCGGTTGTCAAAATTGCTTCTGATAAAGTTTCTACCGTTGCTGAATTTGCCGACTC
AGCAAAAATTACTGTCGGAGAAACAGCTATTGCCATTGGTAGCCCGCTTGGAACTGACTACGCAAACTCTGTAACACAAG
GAATTGTCTCAAGTCTAAGTCGTACAGTAACAATGACTAATGACGATGGTGAAACTATCTCAACAAATGCTATCCAAACC
GATGCTGCTATTAACCCAGGTAACTCTGGAGGTGCTTTGATTAATATTGAAGGACAAGTTATCGGTATCAACTCAAGTAA
AATTTCTTCAACATCTAGTTCAGGTGAGTCTGTAGAAGGTATGGGATTTGCCATTCCATCTAATGATGTTGTTAAAATCA
TCAATCAATTGGAAGAAAACGGAAAAGTTATTCGTCCAGCACTTGGTATCACAATGGCTAACTTAAGCGATCTCTCAACT
GTATCTATTAGCCACCTCAACATTCCAACTAGCGTCACTGGTGGTGTTGTTGTTGCTTCAGTACAATCAGGTATGCCTGC
TGAAGGAACTCTTGAAAGATACGATGTCATCACAGCTATTGATGACGAAGAAGTTAACTCAATCACAGACCTTCAAAGTA
TTCTTTACGGACACTCAACTGGAGACTCTGTCAAAGTTACTTTCTACCGCGGTACAACTAAGAAAACTGAAACAATTAAA
CTAACTAAAACAACTCAAGACCTCTCTTCTTCATCAAATTCATCAAATCAAAATCAATAA

Domains

Predicted by InterproScan.

Trypsin-like peptidase domain (Trypsin_2)

(118-263)

PDZ domain (PDZ_2)

(306-401)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

63.861

96.42

0.616
  htrA Streptococcus gordonii str. Challis substr. CH1

61.097

95.704

0.585
  htrA Streptococcus mitis NCTC 12261

59.259

96.659

0.573
  htrA Streptococcus pneumoniae TIGR4

59.649

95.227

0.568
  htrA Streptococcus pneumoniae D39

59.649

95.227

0.568
  htrA Streptococcus pneumoniae Rx1

59.649

95.227

0.568
  htrA Streptococcus pneumoniae R6

59.649

95.227

0.568

Multiple sequence alignment