Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   GO596_RS03185 Genome accession   NZ_CP046628
Coordinates   620054..620836 (-) Length   260 a.a.
NCBI ID   WP_033153625.1    Uniprot ID   A0A1G9LUB8
Organism   Streptococcus equinus strain CNU 77-23     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 615054..625836
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO596_RS03165 (GO596_03165) - 615980..616174 (-) 195 WP_004233691.1 DUF951 domain-containing protein -
  GO596_RS03170 (GO596_03170) - 616185..617069 (-) 885 WP_027968263.1 diacylglycerol/lipid kinase family protein -
  GO596_RS03175 (GO596_03175) dnaN 617200..618336 (-) 1137 WP_021143391.1 DNA polymerase III subunit beta -
  GO596_RS03180 (GO596_03180) dnaA 618494..619849 (-) 1356 WP_024344479.1 chromosomal replication initiator protein DnaA -
  GO596_RS03185 (GO596_03185) spo0J 620054..620836 (-) 783 WP_033153625.1 ParB/RepB/Spo0J family partition protein Regulator
  GO596_RS03190 (GO596_03190) htrA 620897..622156 (-) 1260 WP_157339187.1 S1C family serine protease Regulator
  GO596_RS03195 (GO596_03195) rlmH 622369..622848 (+) 480 WP_027968267.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29875.59 Da        Isoelectric Point: 9.9946

>NTDB_id=406231 GO596_RS03185 WP_033153625.1 620054..620836(-) (spo0J) [Streptococcus equinus strain CNU 77-23]
MTETLNLINIDDISPNPYQPRLEFKQEELEELSRSIKANGLIQPIIVRKSAIFGYELIAGERRLKASKMAGLSEIPAIIK
EISNKESMQLAIVENLQRSDLNPIEEAKAYQQLLDRNQMTHEELAQFMGKSRPYITNCLRLLNLPSAISKAVERGQLSQG
HARVLLTLKNEKEQEKWYQKVITEEISVRKLEELVKKSKPTKKSSKKNKKNIFIRHQEEELSKLLGVPVSLSLAKSGFKG
DLQLHFQSEEDFNRIINRLK

Nucleotide


Download         Length: 783 bp        

>NTDB_id=406231 GO596_RS03185 WP_033153625.1 620054..620836(-) (spo0J) [Streptococcus equinus strain CNU 77-23]
ATGACTGAGACACTTAACCTAATAAATATTGACGATATTTCTCCAAATCCTTACCAACCACGCTTAGAATTTAAACAAGA
AGAATTAGAAGAGCTATCTCGCTCAATCAAAGCTAATGGCCTTATTCAGCCCATTATCGTTCGAAAATCCGCTATCTTTG
GATATGAGCTTATAGCAGGAGAGAGACGTCTTAAAGCTTCTAAAATGGCTGGTTTGAGCGAAATTCCAGCGATTATCAAA
GAAATTTCTAATAAAGAAAGTATGCAACTGGCTATTGTCGAAAATTTGCAACGATCAGACCTTAATCCCATCGAGGAAGC
AAAAGCCTATCAGCAATTATTAGACAGAAATCAGATGACACACGAAGAATTGGCTCAATTCATGGGAAAATCTCGTCCTT
ACATCACCAATTGCTTACGATTATTGAATTTACCAAGTGCCATTTCTAAAGCCGTTGAGCGAGGGCAACTATCCCAAGGT
CACGCGCGCGTGCTTCTCACATTAAAAAATGAAAAAGAACAAGAGAAGTGGTATCAAAAAGTCATTACTGAAGAAATTAG
CGTCCGAAAACTGGAAGAACTGGTCAAAAAATCTAAACCCACTAAAAAATCTTCAAAAAAAAATAAAAAAAATATTTTTA
TTCGTCATCAAGAAGAAGAACTGTCAAAATTGTTAGGAGTCCCAGTTAGCTTATCCCTTGCCAAATCAGGCTTCAAGGGA
GATTTGCAATTGCATTTTCAGAGCGAAGAAGACTTTAACAGAATTATCAACAGGCTAAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-197)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1G9LUB8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

61.004

99.615

0.608

Multiple sequence alignment