Detailed information NTG0040592

Bioinformatically predicted

Overview

• Name: ciaR
• Type: Regulator
• Locus tag: SSUJS14_RS05375
• Genome accession: NC_017618
• Coordinates: 1083155..1083826 (-)
• Length: 223 a.a.
• NCBI ID: WP_009909965.1
• Uniprot ID: -
• Organism: Streptococcus suis JS14
• Function: repress competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1078155..1088826

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSUJS14_RS05350 (SSUJS14_1065)	rpsT	1078954..1079193 (+)	240	WP_162038634.1	30S ribosomal protein S20	-
SSUJS14_RS05355 (SSUJS14_1066)	tnpA	1079345..1079809 (-)	465	WP_012775157.1	IS200/IS605-like element ISSsu4 family transposase	-
SSUJS14_RS05360 (SSUJS14_1067)	-	1080223..1081452 (-)	1230	WP_012027071.1	transglutaminase domain-containing protein	-
SSUJS14_RS05370 (SSUJS14_1069)	ciaH	1081783..1083162 (-)	1380	WP_012027074.1	HAMP domain-containing sensor histidine kinase	Regulator
SSUJS14_RS05375 (SSUJS14_1070)	ciaR	1083155..1083826 (-)	672	WP_009909965.1	response regulator transcription factor	Regulator
SSUJS14_RS05380 (SSUJS14_1071)	-	1084020..1084400 (-)	381	WP_012027076.1	hypothetical protein	-
SSUJS14_RS05385 (SSUJS14_1072)	-	1084785..1085988 (+)	1204	Protein_1001	IS110 family transposase	-
SSUJS14_RS05390 (SSUJS14_1074)	phoU	1086189..1086845 (-)	657	WP_012028219.1	phosphate signaling complex protein PhoU	-
SSUJS14_RS05395 (SSUJS14_1075)	pstB	1086874..1087632 (-)	759	WP_002937614.1	phosphate ABC transporter ATP-binding protein PstB	-
SSUJS14_RS05400 (SSUJS14_1076)	pstB	1087644..1088447 (-)	804	WP_002940866.1	phosphate ABC transporter ATP-binding protein PstB	-

Sequence

Protein

• Length: 223 a.a.
• Molecular weight: 25290.00 Da
• Isoelectric Point: 4.2183

>NTDB_id=40592 SSUJS14_RS05375 WP_009909965.1 1083155..1083826(-) (ciaR) [Streptococcus suis JS14]
MIKILLVEDDLSLSNSVFDFLDDFADVMQVFDGEEGVYEAETGVYDLILLDLMLPEKDGFQVLKELREKGVTTPVLITTA
KESLEDKGHGFELGADDYLTKPFYLEELKMRIQALLKRAGKFNENTLTFGDVTVDLSTNMTMVNGEEVELLGKEFDLLVY
FLQNQNVILPKTQIFDRIWGFDSDTTISVVEVYVSKIRKKLKGTTFGENLQTLRSVGYILKNA

Nucleotide

• Length: 672 bp

>NTDB_id=40592 SSUJS14_RS05375 WP_009909965.1 1083155..1083826(-) (ciaR) [Streptococcus suis JS14]
ATGATTAAAATATTGTTAGTGGAAGATGATTTAAGTCTATCAAATTCTGTTTTCGATTTCTTAGATGATTTTGCGGATGT
TATGCAGGTTTTTGATGGTGAAGAGGGCGTTTATGAGGCGGAAACAGGCGTTTATGATTTGATTCTTTTGGATTTAATGT
TACCTGAAAAAGACGGCTTTCAAGTCTTGAAAGAGTTACGTGAAAAGGGGGTTACGACACCAGTTCTGATTACAACAGCC
AAGGAAAGTCTAGAGGATAAAGGCCATGGTTTTGAATTGGGGGCTGATGACTATTTGACAAAACCGTTTTATTTAGAAGA
ATTGAAGATGCGAATTCAAGCTCTATTAAAACGAGCGGGTAAGTTTAATGAAAACACACTAACCTTTGGAGATGTGACAG
TTGACCTATCTACAAATATGACGATGGTAAATGGCGAAGAAGTTGAACTGTTAGGAAAAGAATTTGATCTACTAGTTTAT
TTCTTGCAAAATCAAAATGTTATTTTGCCAAAAACACAAATTTTTGACCGTATTTGGGGCTTTGACAGTGATACTACAAT
TTCAGTAGTAGAGGTATATGTTTCTAAAATTAGGAAAAAGTTGAAAGGAACGACTTTTGGGGAAAATCTTCAAACCCTGC
GTAGTGTCGGGTACATTCTAAAAAATGCCTAA

Domains

Predicted by InterProScan.

• Response regulator receiver domain (Response_reg) (4-112)

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (145-220)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ciaR	Streptococcus mutans UA159	90.135	100	0.901
ciaR	Streptococcus pneumoniae Rx1	88.341	100	0.883
ciaR	Streptococcus pneumoniae D39	88.341	100	0.883
ciaR	Streptococcus pneumoniae R6	88.341	100	0.883
ciaR	Streptococcus pneumoniae TIGR4	88.341	100	0.883
covR	Lactococcus lactis subsp. lactis strain DGCC12653	38.496	100	0.39
vicR	Streptococcus mutans UA159	35.47	100	0.372
covR	Streptococcus salivarius strain HSISS4	35.841	100	0.363