Detailed information NTG0405061

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: GOM46_RS02765
• Genome accession: NZ_CP046525
• Coordinates: 550921..551511 (+)
• Length: 196 a.a.
• NCBI ID: WP_000613459.1
• Uniprot ID: I2J9B0
• Organism: Streptococcus infantis strain SO
• Function: degradation of ComX; degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 545921..556511

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOM46_RS02735 (GOM46_02720)	-	546003..546743 (+)	741	WP_235083946.1	MerR family transcriptional regulator	-
GOM46_RS02740 (GOM46_02725)	-	546785..547960 (-)	1176	WP_235083947.1	NAD(P)/FAD-dependent oxidoreductase	-
GOM46_RS02745 (GOM46_02730)	-	548017..548862 (-)	846	WP_235083948.1	DegV family protein	-
GOM46_RS02750 (GOM46_02735)	-	548987..549544 (+)	558	WP_004252362.1	TetR/AcrR family transcriptional regulator	-
GOM46_RS02755 (GOM46_02740)	-	549563..550030 (+)	468	WP_006150202.1	deoxycytidylate deaminase	-
GOM46_RS02760 (GOM46_02745)	upp	550119..550748 (+)	630	WP_006150334.1	uracil phosphoribosyltransferase	-
GOM46_RS02765 (GOM46_02750)	clpP	550921..551511 (+)	591	WP_000613459.1	ATP-dependent Clp protease proteolytic subunit ClpP	Regulator
GOM46_RS02770 (GOM46_02755)	-	551587..551856 (+)	270	WP_235083949.1	YlbG family protein	-
GOM46_RS02775 (GOM46_02760)	-	551945..553105 (+)	1161	WP_235083950.1	ABC transporter substrate-binding protein	-
GOM46_RS02780 (GOM46_02765)	-	553211..554080 (+)	870	WP_006150094.1	branched-chain amino acid ABC transporter permease	-
GOM46_RS02785 (GOM46_02770)	-	554084..555040 (+)	957	WP_235083951.1	branched-chain amino acid ABC transporter permease	-
GOM46_RS02790 (GOM46_02775)	-	555040..555804 (+)	765	WP_049509414.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21403.42 Da
• Isoelectric Point: 4.4829

>NTDB_id=405061 GOM46_RS02765 WP_000613459.1 550921..551511(+) (clpP) [Streptococcus infantis strain SO]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRKTLEQILADNSGK
SVEQIHADAERDYWMSAQETLEYGFIDEIMANNSLN

Nucleotide

• Length: 591 bp

>NTDB_id=405061 GOM46_RS02765 WP_000613459.1 550921..551511(+) (clpP) [Streptococcus infantis strain SO]
ATGATTCCTGTAGTTATTGAACAAACAAGTCGTGGAGAACGTTCATATGACATATACTCACGTCTTCTAAAAGATCGTAT
CATCATGTTGACTGGACCAGTCGAAGACAATATGGCAAACTCAGTTATCGCCCAATTGCTTTTCTTGGATGCCCAAGATA
GTACAAAAGATATTTACCTTTATGTAAATACACCAGGTGGGTCTGTATCAGCTGGTTTGGCAATCGTTGATACCATGAAC
TTTATCAAGGCAGATGTCCAAACTATCGTTATGGGGATGGCAGCTTCAATGGGAACAATTATTGCCTCAAGTGGAGCAAA
AGGCAAACGTTTCATGCTTCCAAATGCAGAGTACATGATTCACCAACCAATGGGTGGTACAGGTGGTGGTACTCAGCAAA
CAGATATGGCTATCGCTGCTGAACATTTGCTTAAAACTCGTAAGACTTTAGAGCAAATTCTTGCAGATAACTCTGGTAAA
TCAGTTGAGCAAATACATGCAGATGCTGAACGTGATTACTGGATGAGTGCTCAAGAAACACTTGAATATGGTTTCATTGA
TGAAATTATGGCCAATAATTCTTTGAATTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

3D structure

• AlphaFold DB: I2J9B0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pneumoniae Rx1	95.408	100	0.954
clpP	Streptococcus pneumoniae D39	95.408	100	0.954
clpP	Streptococcus pneumoniae R6	95.408	100	0.954
clpP	Streptococcus pneumoniae TIGR4	95.408	100	0.954
clpP	Streptococcus thermophilus LMD-9	91.795	99.49	0.913
clpP	Streptococcus thermophilus LMG 18311	91.795	99.49	0.913
clpP	Streptococcus pyogenes JRS4	91.795	99.49	0.913
clpP	Streptococcus pyogenes MGAS315	91.795	99.49	0.913
clpP	Streptococcus mutans UA159	89.231	99.49	0.888
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	88.205	99.49	0.878
clpP	Lactococcus lactis subsp. cremoris KW2	87.692	99.49	0.872
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.031	98.469	0.571
clpP	Bacillus subtilis subsp. subtilis str. 168	57.292	97.959	0.561