Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | GE024_RS02305 | Genome accession | NZ_CP046521 |
| Coordinates | 430658..431248 (+) | Length | 196 a.a. |
| NCBI ID | WP_093998442.1 | Uniprot ID | - |
| Organism | Streptococcus canis strain HL_100 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 425658..436248
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GE024_RS02290 (GE024_02285) | - | 426443..427888 (-) | 1446 | WP_003046866.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase | - |
| GE024_RS02295 (GE024_02290) | - | 427976..429610 (+) | 1635 | WP_093998443.1 | polysaccharide biosynthesis protein | - |
| GE024_RS02300 (GE024_02295) | upp | 429808..430437 (+) | 630 | WP_003046872.1 | uracil phosphoribosyltransferase | - |
| GE024_RS02305 (GE024_02300) | clpP | 430658..431248 (+) | 591 | WP_093998442.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| GE024_RS02310 (GE024_02305) | - | 431537..431983 (+) | 447 | WP_039994942.1 | YlbF family regulator | - |
| GE024_RS02315 (GE024_02310) | - | 431983..432270 (+) | 288 | WP_003046884.1 | YlbG family protein | - |
| GE024_RS11100 | - | 432522..432662 (+) | 141 | WP_232038563.1 | hypothetical protein | - |
| GE024_RS02325 (GE024_02320) | tmk | 433016..433651 (+) | 636 | WP_093998441.1 | dTMP kinase | - |
| GE024_RS02330 (GE024_02325) | - | 433667..434539 (+) | 873 | WP_003046898.1 | DNA polymerase III subunit delta' | - |
| GE024_RS02335 (GE024_02330) | ricT | 434536..435336 (+) | 801 | WP_093998440.1 | regulatory iron-sulfur-containing complex subunit RicT | - |
| GE024_RS02340 (GE024_02335) | yabA | 435329..435652 (+) | 324 | WP_003046904.1 | DNA replication initiation control protein YabA | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21634.85 Da Isoelectric Point: 5.2834
>NTDB_id=404847 GE024_RS02305 WP_093998442.1 430658..431248(+) (clpP) [Streptococcus canis strain HL_100]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQVHKDAERDYWMSAEETLAYGFIDEIMENNELK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQVHKDAERDYWMSAEETLAYGFIDEIMENNELK
Nucleotide
Download Length: 591 bp
>NTDB_id=404847 GE024_RS02305 WP_093998442.1 430658..431248(+) (clpP) [Streptococcus canis strain HL_100]
ATGATTCCTGTTGTTATTGAACAAACCAGTCGTGGCGAACGTTCTTACGACATTTATTCACGCTTGTTAAAAGACCGTAT
CATCATGTTGACAGGTCCTGTTGAAGATAATATGGCAAATTCTGTCATTGCGCAGCTTTTATTCCTTGATGCTCAAGACA
ATACGAAAGATATTTATTTATATGTCAATACACCTGGTGGCTCTGTCTCAGCGGGTTTGGCTATTGTAGACACTATGAAC
TTTATCAAGGCTGATGTTCAGACTATTGTGATGGGGATGGCGGCTTCTATGGGGACTGTCATTGCTTCATCAGGAACTAA
AGGCAAGCGCTTTATGTTACCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACAGGTGGTGGCACACAACAAA
CGGATATGGCTATTGCGGCAGAGCACCTCTTGAAAACACGTCACCGTTTAGAAAAAATCTTGGCACAAAATGCTGGAAAA
ACCATTAAACAAGTTCACAAAGATGCTGAACGTGACTATTGGATGAGTGCCGAAGAAACCTTAGCTTATGGTTTTATTGA
CGAGATTATGGAAAACAACGAATTAAAATAA
ATGATTCCTGTTGTTATTGAACAAACCAGTCGTGGCGAACGTTCTTACGACATTTATTCACGCTTGTTAAAAGACCGTAT
CATCATGTTGACAGGTCCTGTTGAAGATAATATGGCAAATTCTGTCATTGCGCAGCTTTTATTCCTTGATGCTCAAGACA
ATACGAAAGATATTTATTTATATGTCAATACACCTGGTGGCTCTGTCTCAGCGGGTTTGGCTATTGTAGACACTATGAAC
TTTATCAAGGCTGATGTTCAGACTATTGTGATGGGGATGGCGGCTTCTATGGGGACTGTCATTGCTTCATCAGGAACTAA
AGGCAAGCGCTTTATGTTACCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACAGGTGGTGGCACACAACAAA
CGGATATGGCTATTGCGGCAGAGCACCTCTTGAAAACACGTCACCGTTTAGAAAAAATCTTGGCACAAAATGCTGGAAAA
ACCATTAAACAAGTTCACAAAGATGCTGAACGTGACTATTGGATGAGTGCCGAAGAAACCTTAGCTTATGGTTTTATTGA
CGAGATTATGGAAAACAACGAATTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus pyogenes JRS4 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus pyogenes MGAS315 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus pneumoniae Rx1 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus pneumoniae D39 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus pneumoniae R6 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus pneumoniae TIGR4 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus thermophilus LMG 18311 |
90.306 |
100 |
0.903 |
| clpP | Streptococcus thermophilus LMD-9 |
90.306 |
100 |
0.903 |
| clpP | Streptococcus mutans UA159 |
90.306 |
100 |
0.903 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
85.714 |
100 |
0.857 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
85.204 |
100 |
0.852 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
56.633 |
100 |
0.566 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
56.477 |
98.469 |
0.556 |