Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | FOB92_RS05965 | Genome accession | NZ_CP046335 |
| Coordinates | 1192838..1193428 (-) | Length | 196 a.a. |
| NCBI ID | WP_000613475.1 | Uniprot ID | F9HD24 |
| Organism | Streptococcus mitis strain FDAARGOS_684 | ||
| Function | degradation of ComX; degradation of ComW (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1184948..1194786 | 1192838..1193428 | within | 0 |
Gene organization within MGE regions
Location: 1184948..1194786
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB92_RS05920 (FOB92_05920) | ftsE | 1184948..1185640 (-) | 693 | WP_000022269.1 | cell division ATP-binding protein FtsE | - |
| FOB92_RS05930 (FOB92_05930) | - | 1186862..1187518 (-) | 657 | WP_000268667.1 | CBS domain-containing protein | - |
| FOB92_RS05935 (FOB92_05935) | - | 1187826..1188536 (-) | 711 | WP_000062200.1 | ABC transporter ATP-binding protein | - |
| FOB92_RS05940 (FOB92_05940) | - | 1188536..1189300 (-) | 765 | WP_001185997.1 | ABC transporter ATP-binding protein | - |
| FOB92_RS05945 (FOB92_05945) | - | 1189300..1190256 (-) | 957 | WP_000662290.1 | branched-chain amino acid ABC transporter permease | - |
| FOB92_RS05950 (FOB92_05950) | - | 1190260..1191129 (-) | 870 | WP_000941427.1 | branched-chain amino acid ABC transporter permease | - |
| FOB92_RS05955 (FOB92_05955) | - | 1191246..1192406 (-) | 1161 | WP_000726117.1 | ABC transporter substrate-binding protein | - |
| FOB92_RS05960 (FOB92_05960) | - | 1192484..1192759 (-) | 276 | WP_000462122.1 | YlbG family protein | - |
| FOB92_RS05965 (FOB92_05965) | clpP | 1192838..1193428 (-) | 591 | WP_000613475.1 | ATP-dependent Clp protease proteolytic subunit ClpP | Regulator |
| FOB92_RS05970 (FOB92_05970) | upp | 1193601..1194230 (-) | 630 | WP_000515974.1 | uracil phosphoribosyltransferase | - |
| FOB92_RS05975 (FOB92_05975) | - | 1194319..1194786 (-) | 468 | WP_000136976.1 | deoxycytidylate deaminase | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21340.32 Da Isoelectric Point: 4.4910
>NTDB_id=402816 FOB92_RS05965 WP_000613475.1 1192838..1193428(-) (clpP) [Streptococcus mitis strain FDAARGOS_684]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQ
SIEKVHADAERDNWMSAQETLEYGFIDEIMANNSLN
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQ
SIEKVHADAERDNWMSAQETLEYGFIDEIMANNSLN
Nucleotide
Download Length: 591 bp
>NTDB_id=402816 FOB92_RS05965 WP_000613475.1 1192838..1193428(-) (clpP) [Streptococcus mitis strain FDAARGOS_684]
ATGATTCCTGTAGTTATTGAACAAACAAGCCGTGGAGAACGTTCTTACGATATTTACTCACGTCTTCTCAAAGACCGCAT
CATTATGCTGACAGGCCCAGTTGAAGACAATATGGCTAACTCTGTTATTGCCCAATTGCTTTTCTTAGATGCCCAAGATA
GTACAAAAGATATTTACCTTTATGTCAATACACCTGGTGGTTCCGTTTCAGCTGGTTTGGCAATCGTTGATACCATGAAC
TTTATCAAGGCCGATGTCCAAACCATTGTTATGGGAATGGCAGCATCTATGGGGACGGTCATTGCATCAAGTGGAGCAAA
AGGCAAACGTTTCATGCTTCCAAATGCAGAGTATATGATCCACCAACCAATGGGTGGTACAGGTGGAGGTACTCAGCAAA
CCGATATGGCGATCGCTGCAGAACACTTGCTTAAAACTCGTAATACTTTGGAAAAAATCTTGGCTGAAAATTCAGGTCAG
TCAATCGAAAAAGTCCATGCAGATGCAGAACGAGATAACTGGATGAGCGCCCAGGAAACACTTGAATATGGCTTTATTGA
TGAAATCATGGCCAACAATTCATTGAATTAA
ATGATTCCTGTAGTTATTGAACAAACAAGCCGTGGAGAACGTTCTTACGATATTTACTCACGTCTTCTCAAAGACCGCAT
CATTATGCTGACAGGCCCAGTTGAAGACAATATGGCTAACTCTGTTATTGCCCAATTGCTTTTCTTAGATGCCCAAGATA
GTACAAAAGATATTTACCTTTATGTCAATACACCTGGTGGTTCCGTTTCAGCTGGTTTGGCAATCGTTGATACCATGAAC
TTTATCAAGGCCGATGTCCAAACCATTGTTATGGGAATGGCAGCATCTATGGGGACGGTCATTGCATCAAGTGGAGCAAA
AGGCAAACGTTTCATGCTTCCAAATGCAGAGTATATGATCCACCAACCAATGGGTGGTACAGGTGGAGGTACTCAGCAAA
CCGATATGGCGATCGCTGCAGAACACTTGCTTAAAACTCGTAATACTTTGGAAAAAATCTTGGCTGAAAATTCAGGTCAG
TCAATCGAAAAAGTCCATGCAGATGCAGAACGAGATAACTGGATGAGCGCCCAGGAAACACTTGAATATGGCTTTATTGA
TGAAATCATGGCCAACAATTCATTGAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus pneumoniae Rx1 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus pneumoniae D39 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus pneumoniae R6 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus pneumoniae TIGR4 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus thermophilus LMG 18311 |
93.333 |
99.49 |
0.929 |
| clpP | Streptococcus thermophilus LMD-9 |
93.333 |
99.49 |
0.929 |
| clpP | Streptococcus pyogenes JRS4 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus pyogenes MGAS315 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus mutans UA159 |
86.224 |
100 |
0.862 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
85.128 |
99.49 |
0.847 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
84.615 |
99.49 |
0.842 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
58.854 |
97.959 |
0.577 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.031 |
98.469 |
0.571 |